Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PTCD2Q8WV60 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 AC135776.1-201ENST00000319817 2481 ntBASIC18.57■□□□□ 0.56
PTCD2Q8WV60 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.57■□□□□ 0.56
PTCD2Q8WV60 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 AL163051.1-201ENST00000569214 1512 ntBASIC18.56■□□□□ 0.56
PTCD2Q8WV60 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 RNF152P1-201ENST00000397754 604 ntBASIC18.56■□□□□ 0.56
PTCD2Q8WV60 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 TSPY5P-201ENST00000426936 936 ntBASIC18.56■□□□□ 0.56
PTCD2Q8WV60 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PTCD2Q8WV60 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 LST1-206ENST00000376090 689 ntTSL 2 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 LST1-209ENST00000376096 565 ntTSL 2 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 LST1-210ENST00000376099 610 ntTSL 2 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 MIR149-201ENST00000384879 89 ntBASIC18.55■□□□□ 0.56
PTCD2Q8WV60 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 LST1-214ENST00000418507 726 ntTSL 2 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 KRT18P38-201ENST00000449496 1282 ntBASIC18.55■□□□□ 0.56
PTCD2Q8WV60 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 AC009065.1-201ENST00000564055 1225 ntBASIC18.55■□□□□ 0.56
PTCD2Q8WV60 MIR3180-4-201ENST00000582223 153 ntBASIC18.55■□□□□ 0.56
PTCD2Q8WV60 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PTCD2Q8WV60 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms