Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRAF3IP1Q8TDR0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRAF3IP1Q8TDR0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRAF3IP1Q8TDR0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 KRT8P50-201ENST00000562022 1438 ntBASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 AC092338.2-201ENST00000568827 1415 ntBASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TRAF3IP1Q8TDR0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 AC135776.1-201ENST00000319817 2481 ntBASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAF3IP1Q8TDR0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 KRT18P23-201ENST00000435622 1283 ntBASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 AC007663.1-201ENST00000438948 1240 ntBASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 AC128688.1-201ENST00000487626 519 ntBASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 CR769767.2-201ENST00000622735 460 ntBASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAF3IP1Q8TDR0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms