Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 AC012317.2-201ENST00000623305 2251 ntBASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 NBPF21P-201ENST00000425093 1451 ntBASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 KRT8P11-201ENST00000409686 1436 ntBASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 AC012313.1-201ENST00000593393 3059 ntBASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB3IL1Q8TBN0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 GUSBP6-202ENST00000438529 1198 ntBASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 TSPY6P-201ENST00000448518 926 ntBASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB3IL1Q8TBN0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 HTR7P1-201ENST00000538670 1336 ntBASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB3IL1Q8TBN0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 SLC29A4P1-201ENST00000398760 971 ntBASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB3IL1Q8TBN0 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms