Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HMGCLL1Q8TB92 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGCLL1Q8TB92 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.01■□□□□ 0.47
HMGCLL1Q8TB92 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGCLL1Q8TB92 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HMGCLL1Q8TB92 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLL1Q8TB92 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLL1Q8TB92 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGCLL1Q8TB92 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLL1Q8TB92 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLL1Q8TB92 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLL1Q8TB92 FZD10-202ENST00000539839 3282 ntBASIC18.01■□□□□ 0.47
HMGCLL1Q8TB92 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18■□□□□ 0.47
HMGCLL1Q8TB92 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 COX11P1-201ENST00000489116 835 ntBASIC18■□□□□ 0.47
HMGCLL1Q8TB92 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 AC112497.1-201ENST00000624824 639 ntBASIC18■□□□□ 0.47
HMGCLL1Q8TB92 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 MYC-208ENST00000641036 567 ntBASIC18■□□□□ 0.47
HMGCLL1Q8TB92 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 AC093677.2-201ENST00000600169 1863 ntBASIC18■□□□□ 0.47
HMGCLL1Q8TB92 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18■□□□□ 0.47
HMGCLL1Q8TB92 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 AC112777.1-201ENST00000540175 1423 ntBASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 KRT18P57-201ENST00000443599 1254 ntBASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 FAM210CP-201ENST00000445714 574 ntBASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 LINC00896-202ENST00000609602 2128 ntBASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLL1Q8TB92 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 KRT18P23-201ENST00000435622 1283 ntBASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 RN7SL850P-201ENST00000579959 291 ntBASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 MIR3180-4-201ENST00000582223 153 ntBASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGCLL1Q8TB92 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms