Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 RNF126P1-202ENST00000569893 925 ntBASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 MIR3180-1-201ENST00000580374 94 ntBASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 MIR3180-3-201ENST00000584616 94 ntBASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 AC117500.6-201ENST00000624871 588 ntBASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 AC073592.3-201ENST00000625118 1834 ntBASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NKX2-3Q8TAU0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 AC011498.5-201ENST00000592027 486 ntBASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 AL136038.4-201ENST00000603606 1261 ntBASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 AL031008.1-201ENST00000619963 541 ntBASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NKX2-3Q8TAU0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 AC104692.2-201ENST00000603054 253 ntBASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.67■■□□□ 1.06
NKX2-3Q8TAU0 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.66■■□□□ 1.06
NKX2-3Q8TAU0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NKX2-3Q8TAU0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.66■■□□□ 1.06
NKX2-3Q8TAU0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NKX2-3Q8TAU0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NKX2-3Q8TAU0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.66■■□□□ 1.06
NKX2-3Q8TAU0 AC016734.2-201ENST00000624325 1377 ntBASIC21.66■■□□□ 1.06
NKX2-3Q8TAU0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NKX2-3Q8TAU0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.66■■□□□ 1.06
NKX2-3Q8TAU0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.66■■□□□ 1.06
NKX2-3Q8TAU0 EMBP1-201ENST00000458200 901 ntBASIC21.66■■□□□ 1.06
NKX2-3Q8TAU0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NKX2-3Q8TAU0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.66■■□□□ 1.06
NKX2-3Q8TAU0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.66■■□□□ 1.06
NKX2-3Q8TAU0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
NKX2-3Q8TAU0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.66■■□□□ 1.06
NKX2-3Q8TAU0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NKX2-3Q8TAU0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
NKX2-3Q8TAU0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms