Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 MIR3917-201ENST00000580971 93 ntBASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SRFBP1Q8NEF9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.52■□□□□ 0.39
SRFBP1Q8NEF9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SRFBP1Q8NEF9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SRFBP1Q8NEF9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.52■□□□□ 0.39
SRFBP1Q8NEF9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
SRFBP1Q8NEF9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
SRFBP1Q8NEF9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.52■□□□□ 0.39
SRFBP1Q8NEF9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
SRFBP1Q8NEF9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SRFBP1Q8NEF9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 OR6D1P-202ENST00000641007 5290 ntBASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 AC005521.1-201ENST00000393351 872 ntBASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 GMCL1P1-201ENST00000463439 1581 ntBASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 AC008687.5-201ENST00000593746 558 ntBASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 AC073508.3-201ENST00000619697 1419 ntBASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 AC009113.1-201ENST00000570267 2443 ntBASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SRFBP1Q8NEF9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SRFBP1Q8NEF9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 SDHAP2-201ENST00000455183 2001 ntBASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SRFBP1Q8NEF9 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms