Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ZNF439Q8NDP4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF439Q8NDP4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF439Q8NDP4 MIR4497-201ENST00000583208 89 ntBASIC15.23■□□□□ 0.03
ZNF439Q8NDP4 MIR3180-5-201ENST00000583743 153 ntBASIC15.23■□□□□ 0.03
ZNF439Q8NDP4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF439Q8NDP4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF439Q8NDP4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ZNF439Q8NDP4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF439Q8NDP4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF439Q8NDP4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF439Q8NDP4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF439Q8NDP4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF439Q8NDP4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF439Q8NDP4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF439Q8NDP4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF439Q8NDP4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF439Q8NDP4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF439Q8NDP4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 TSPY17P-201ENST00000450329 467 ntBASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 AL353719.1-201ENST00000566847 864 ntBASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ZNF439Q8NDP4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 MYLKP1-201ENST00000509077 1580 ntBASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 AC092338.2-201ENST00000568827 1415 ntBASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 MIR1238-201ENST00000408483 83 ntBASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 AP003041.3-201ENST00000527151 707 ntBASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.21■□□□□ 0.03
ZNF439Q8NDP4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF439Q8NDP4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.21■□□□□ 0.02
ZNF439Q8NDP4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ZNF439Q8NDP4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.21■□□□□ 0.02
ZNF439Q8NDP4 AC034236.2-201ENST00000606662 1610 ntBASIC15.21■□□□□ 0.02
ZNF439Q8NDP4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF439Q8NDP4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ZNF439Q8NDP4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF439Q8NDP4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF439Q8NDP4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
ZNF439Q8NDP4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF439Q8NDP4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF439Q8NDP4 FZD10-202ENST00000539839 3282 ntBASIC15.2■□□□□ 0.02
ZNF439Q8NDP4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF439Q8NDP4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF439Q8NDP4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.2■□□□□ 0.02
ZNF439Q8NDP4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ZNF439Q8NDP4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF439Q8NDP4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ZNF439Q8NDP4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ZNF439Q8NDP4 AP000593.1-201ENST00000393668 712 ntBASIC15.2■□□□□ 0.02
ZNF439Q8NDP4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF439Q8NDP4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.2■□□□□ 0.02
ZNF439Q8NDP4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms