Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DNAAF3Q8N9W5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
DNAAF3Q8N9W5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
DNAAF3Q8N9W5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.71■□□□□ 0.58
DNAAF3Q8N9W5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 NOC2LP1-202ENST00000452600 2235 ntBASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 AC092338.2-201ENST00000568827 1415 ntBASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DNAAF3Q8N9W5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 ESPNP-201ENST00000270691 2015 ntBASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DNAAF3Q8N9W5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 KRT18P23-201ENST00000435622 1283 ntBASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 AC007663.1-201ENST00000438948 1240 ntBASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 CR769767.2-201ENST00000622735 460 ntBASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 AL133373.2-201ENST00000623187 2828 ntBASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DNAAF3Q8N9W5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms