Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 AL096828.2-201ENST00000567259 1965 ntBASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
LINC01561Q8N1V8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.33□□□□□ -0.43
LINC01561Q8N1V8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
LINC01561Q8N1V8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 KRT18P55-202ENST00000578578 1546 ntBASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 MIR149-201ENST00000384879 89 ntBASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 AC009065.1-201ENST00000564055 1225 ntBASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 AC104771.1-201ENST00000603335 964 ntBASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 ABBA01031674.1-201ENST00000635145 728 ntBASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 KRT8P7-201ENST00000533003 1432 ntBASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 KRT8P50-201ENST00000562022 1438 ntBASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LINC01561Q8N1V8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 AL023284.2-201ENST00000405850 579 ntBASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 RPS2P4-201ENST00000476944 856 ntBASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 CA15P1-201ENST00000481698 905 ntBASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 RN7SL471P-201ENST00000580476 299 ntBASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 AC073195.1-201ENST00000607241 877 ntBASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 AP000692.2-201ENST00000608391 879 ntBASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01561Q8N1V8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms