Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BEST3Q8N1M1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.03■□□□□ 0.32
BEST3Q8N1M1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
BEST3Q8N1M1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 AC016734.2-201ENST00000624325 1377 ntBASIC17.02■□□□□ 0.32
BEST3Q8N1M1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 PVRIG2P-201ENST00000435460 978 ntBASIC17.02■□□□□ 0.32
BEST3Q8N1M1 DUSP5P1-201ENST00000441325 1139 ntBASIC17.02■□□□□ 0.32
BEST3Q8N1M1 KRT126P-201ENST00000549467 1181 ntBASIC17.02■□□□□ 0.32
BEST3Q8N1M1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 NEFHP1-201ENST00000412845 2629 ntBASIC17.02■□□□□ 0.32
BEST3Q8N1M1 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
BEST3Q8N1M1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.02■□□□□ 0.31
BEST3Q8N1M1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
BEST3Q8N1M1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BEST3Q8N1M1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BEST3Q8N1M1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.02■□□□□ 0.31
BEST3Q8N1M1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.02■□□□□ 0.31
BEST3Q8N1M1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.02■□□□□ 0.31
BEST3Q8N1M1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 TSPY22P-201ENST00000427496 604 ntBASIC17.01■□□□□ 0.31
BEST3Q8N1M1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 KRT8P26-201ENST00000534154 1276 ntBASIC17.01■□□□□ 0.31
BEST3Q8N1M1 RNF126P1-202ENST00000569893 925 ntBASIC17.01■□□□□ 0.31
BEST3Q8N1M1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.01■□□□□ 0.31
BEST3Q8N1M1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17■□□□□ 0.31
BEST3Q8N1M1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17■□□□□ 0.31
BEST3Q8N1M1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17■□□□□ 0.31
BEST3Q8N1M1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17■□□□□ 0.31
BEST3Q8N1M1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST3Q8N1M1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17■□□□□ 0.31
BEST3Q8N1M1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST3Q8N1M1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
BEST3Q8N1M1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST3Q8N1M1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST3Q8N1M1 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST3Q8N1M1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST3Q8N1M1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST3Q8N1M1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST3Q8N1M1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BEST3Q8N1M1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17■□□□□ 0.31
BEST3Q8N1M1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17■□□□□ 0.31
BEST3Q8N1M1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17■□□□□ 0.31
BEST3Q8N1M1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17■□□□□ 0.31
BEST3Q8N1M1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17■□□□□ 0.31
BEST3Q8N1M1 KRT8P50-201ENST00000562022 1438 ntBASIC17■□□□□ 0.31
BEST3Q8N1M1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17■□□□□ 0.31
BEST3Q8N1M1 AC092329.2-201ENST00000598402 547 ntBASIC17■□□□□ 0.31
BEST3Q8N1M1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17■□□□□ 0.31
BEST3Q8N1M1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms