Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 REXO1L9P-201ENST00000604264 2108 ntBASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 AC112497.1-201ENST00000624824 639 ntBASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDKL3Q8IVW4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 AC128688.1-201ENST00000487626 519 ntBASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 AC138028.4-201ENST00000564984 1845 ntBASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDKL3Q8IVW4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 AC008764.6-201ENST00000595909 2069 ntBASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 NAPSB-206ENST00000562112 1266 ntBASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CDKL3Q8IVW4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 PHGDH-209ENST00000641074 1780 ntBASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 AC104390.1-201ENST00000555663 520 ntBASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 MIR3180-4-201ENST00000582223 153 ntBASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 AL133373.2-201ENST00000623187 2828 ntBASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDKL3Q8IVW4 AL096828.2-201ENST00000567259 1965 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms