Protein–RNA interactions for Protein: Q8IUF1

CBWD2, COBW domain-containing protein 2, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2Q8IUF1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CBWD2Q8IUF1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 HBZP1-201ENST00000354915 429 ntBASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 HLA-F-220ENST00000434407 884 ntBASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 NTF6B-201ENST00000591913 560 ntBASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 AC135050.7-201ENST00000624508 2218 ntBASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CBWD2Q8IUF1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 SPDYE13P-201ENST00000445314 798 ntBASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 AC083849.1-201ENST00000615227 514 ntBASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 PHGDH-209ENST00000641074 1780 ntBASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.9■□□□□ 0.78
CBWD2Q8IUF1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
CBWD2Q8IUF1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CBWD2Q8IUF1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 AL671277.2-201ENST00000458060 996 ntBASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 VENTXP5-201ENST00000523979 775 ntBASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 LINC01311-201ENST00000565162 1445 ntBASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 LINC01238-205ENST00000567549 1107 ntBASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD2Q8IUF1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CBWD2Q8IUF1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms