Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RAI1Q7Z5J4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAI1Q7Z5J4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
RAI1Q7Z5J4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
RAI1Q7Z5J4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
RAI1Q7Z5J4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RAI1Q7Z5J4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 KRT18P67-201ENST00000432816 1264 ntBASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAI1Q7Z5J4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAI1Q7Z5J4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.59■□□□□ 0.09
RAI1Q7Z5J4 AC243591.1-201ENST00000452967 1364 ntBASIC15.59■□□□□ 0.09
RAI1Q7Z5J4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.59■□□□□ 0.09
RAI1Q7Z5J4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RAI1Q7Z5J4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.59■□□□□ 0.09
RAI1Q7Z5J4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.59■□□□□ 0.09
RAI1Q7Z5J4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAI1Q7Z5J4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.59■□□□□ 0.09
RAI1Q7Z5J4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAI1Q7Z5J4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.59■□□□□ 0.09
RAI1Q7Z5J4 AL024508.2-201ENST00000607749 1894 ntBASIC15.59■□□□□ 0.09
RAI1Q7Z5J4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAI1Q7Z5J4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.59■□□□□ 0.09
RAI1Q7Z5J4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 AC011840.4-201ENST00000578471 627 ntBASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAI1Q7Z5J4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 BX323043.1-201ENST00000641006 1765 ntBASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 AC096582.2-201ENST00000510860 516 ntBASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 SLC25A1P1-201ENST00000528351 927 ntBASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms