Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 AL499627.1-201ENST00000569373 2188 ntBASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 KRT8P50-201ENST00000562022 1438 ntBASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 PCED1CP-201ENST00000419887 785 ntBASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 ZNF444P1-201ENST00000559497 298 ntBASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.12■□□□□ 0.65
RFWD3Q6PCD5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 AC005332.1-201ENST00000577698 1310 ntBASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 VENTXP5-201ENST00000523979 775 ntBASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFWD3Q6PCD5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.1■□□□□ 0.65
RFWD3Q6PCD5 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms