Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 UPF3AP3-201ENST00000420996 769 ntBASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 Z83851.2-201ENST00000609564 659 ntBASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 AL139288.1-201ENST00000623748 933 ntBASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNKSR3Q6P9H4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 AC012640.2-201ENST00000561606 901 ntBASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 AC025062.2-201ENST00000605477 670 ntBASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 AC055717.3-201ENST00000622967 595 ntBASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CNKSR3Q6P9H4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 LINC00602-201ENST00000629776 2065 ntBASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 RNA5SP415-201ENST00000517246 115 ntBASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 AC008735.5-201ENST00000623544 497 ntBASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CNKSR3Q6P9H4 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 KRT18P65-201ENST00000439811 1286 ntBASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 KRT18P3-201ENST00000451602 1288 ntBASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 PCDHAC2-203ENST00000615316 3011 ntBASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CNKSR3Q6P9H4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms