Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 ID1-201ENST00000376105 1233 ntBASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
RUNDC3AQ59EK9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.33■□□□□ 0.37
RUNDC3AQ59EK9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RUNDC3AQ59EK9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RUNDC3AQ59EK9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RUNDC3AQ59EK9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RUNDC3AQ59EK9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RUNDC3AQ59EK9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RUNDC3AQ59EK9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.33■□□□□ 0.37
RUNDC3AQ59EK9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RUNDC3AQ59EK9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RUNDC3AQ59EK9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RUNDC3AQ59EK9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RUNDC3AQ59EK9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RUNDC3AQ59EK9 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.33■□□□□ 0.36
RUNDC3AQ59EK9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.33■□□□□ 0.36
RUNDC3AQ59EK9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RUNDC3AQ59EK9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RUNDC3AQ59EK9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RUNDC3AQ59EK9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.33■□□□□ 0.36
RUNDC3AQ59EK9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.33■□□□□ 0.36
RUNDC3AQ59EK9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.33■□□□□ 0.36
RUNDC3AQ59EK9 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.33■□□□□ 0.36
RUNDC3AQ59EK9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RUNDC3AQ59EK9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RUNDC3AQ59EK9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.33■□□□□ 0.36
RUNDC3AQ59EK9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.33■□□□□ 0.36
RUNDC3AQ59EK9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.33■□□□□ 0.36
RUNDC3AQ59EK9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RUNDC3AQ59EK9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 AC096733.2-201ENST00000609937 1394 ntBASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 SDHAP2-201ENST00000455183 2001 ntBASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 AC128676.1-201ENST00000454392 318 ntBASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 AC006116.8-202ENST00000587620 1550 ntBASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RUNDC3AQ59EK9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms