Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 KRT18P57-201ENST00000443599 1254 ntBASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 RASA4DP-201ENST00000460726 1199 ntBASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM35AQ53FP2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 AL024508.2-201ENST00000607749 1894 ntBASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 AL390961.4-201ENST00000623958 2535 ntBASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 RNF152P1-201ENST00000397754 604 ntBASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 STARP1-201ENST00000397973 869 ntBASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 AC117947.1-201ENST00000427448 529 ntBASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM35AQ53FP2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 TSPY5P-201ENST00000426936 936 ntBASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 HOMER2P1-201ENST00000455653 964 ntBASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM35AQ53FP2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TMEM35AQ53FP2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM35AQ53FP2 PHGDH-209ENST00000641074 1780 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms