Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TSR1Q2NL82 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TSR1Q2NL82 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.13■□□□□ 0.81
TSR1Q2NL82 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSR1Q2NL82 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TSR1Q2NL82 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.13■□□□□ 0.81
TSR1Q2NL82 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.13■□□□□ 0.81
TSR1Q2NL82 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TSR1Q2NL82 RCC2P3-201ENST00000418112 1537 ntBASIC20.13■□□□□ 0.81
TSR1Q2NL82 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.13■□□□□ 0.81
TSR1Q2NL82 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
TSR1Q2NL82 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSR1Q2NL82 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSR1Q2NL82 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSR1Q2NL82 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC20.13■□□□□ 0.81
TSR1Q2NL82 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSR1Q2NL82 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSR1Q2NL82 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TSR1Q2NL82 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.13■□□□□ 0.81
TSR1Q2NL82 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
TSR1Q2NL82 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
TSR1Q2NL82 AC026366.1-201ENST00000488803 879 ntBASIC20.13■□□□□ 0.81
TSR1Q2NL82 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.13■□□□□ 0.81
TSR1Q2NL82 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.13■□□□□ 0.81
TSR1Q2NL82 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.13■□□□□ 0.81
TSR1Q2NL82 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TSR1Q2NL82 ITM2C-210ENST00000620962 501 ntBASIC20.13■□□□□ 0.81
TSR1Q2NL82 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.13■□□□□ 0.81
TSR1Q2NL82 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSR1Q2NL82 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSR1Q2NL82 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.13■□□□□ 0.81
TSR1Q2NL82 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TSR1Q2NL82 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSR1Q2NL82 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TSR1Q2NL82 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSR1Q2NL82 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.13■□□□□ 0.81
TSR1Q2NL82 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSR1Q2NL82 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TSR1Q2NL82 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TSR1Q2NL82 AC134043.2-201ENST00000624206 2238 ntBASIC20.12■□□□□ 0.81
TSR1Q2NL82 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
TSR1Q2NL82 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.12■□□□□ 0.81
TSR1Q2NL82 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.12■□□□□ 0.81
TSR1Q2NL82 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TSR1Q2NL82 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TSR1Q2NL82 KRT18P29-201ENST00000397031 1267 ntBASIC20.12■□□□□ 0.81
TSR1Q2NL82 AP002982.1-201ENST00000492365 877 ntBASIC20.12■□□□□ 0.81
TSR1Q2NL82 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.12■□□□□ 0.81
TSR1Q2NL82 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.12■□□□□ 0.81
TSR1Q2NL82 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TSR1Q2NL82 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TSR1Q2NL82 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 AC008556.1-201ENST00000610908 2040 ntBASIC20.12■□□□□ 0.81
TSR1Q2NL82 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TSR1Q2NL82 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TSR1Q2NL82 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TSR1Q2NL82 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TSR1Q2NL82 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TSR1Q2NL82 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TSR1Q2NL82 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TSR1Q2NL82 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.11■□□□□ 0.81
TSR1Q2NL82 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TSR1Q2NL82 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TSR1Q2NL82 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
TSR1Q2NL82 HTR7P1-201ENST00000538670 1336 ntBASIC20.11■□□□□ 0.81
TSR1Q2NL82 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TSR1Q2NL82 ESRRAP1-201ENST00000400596 1257 ntBASIC20.11■□□□□ 0.81
TSR1Q2NL82 AC004951.3-201ENST00000418645 1148 ntBASIC20.11■□□□□ 0.81
TSR1Q2NL82 NIFKP9-201ENST00000419265 221 ntBASIC20.11■□□□□ 0.81
TSR1Q2NL82 AC004980.1-204ENST00000429707 299 ntBASIC20.11■□□□□ 0.81
TSR1Q2NL82 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.11■□□□□ 0.81
TSR1Q2NL82 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
TSR1Q2NL82 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TSR1Q2NL82 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.11■□□□□ 0.81
TSR1Q2NL82 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TSR1Q2NL82 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TSR1Q2NL82 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TSR1Q2NL82 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms