Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBA52P62987 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBA52P62987 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.84■□□□□ 0.13
UBA52P62987 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBA52P62987 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBA52P62987 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBA52P62987 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBA52P62987 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
UBA52P62987 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBA52P62987 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.84■□□□□ 0.13
UBA52P62987 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.84■□□□□ 0.13
UBA52P62987 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.84■□□□□ 0.13
UBA52P62987 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.84■□□□□ 0.13
UBA52P62987 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBA52P62987 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.84■□□□□ 0.13
UBA52P62987 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBA52P62987 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBA52P62987 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
UBA52P62987 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBA52P62987 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBA52P62987 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBA52P62987 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBA52P62987 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.84■□□□□ 0.13
UBA52P62987 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBA52P62987 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBA52P62987 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.84■□□□□ 0.13
UBA52P62987 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.84■□□□□ 0.13
UBA52P62987 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
UBA52P62987 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.84■□□□□ 0.13
UBA52P62987 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBA52P62987 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBA52P62987 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBA52P62987 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBA52P62987 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
UBA52P62987 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBA52P62987 TEX21P-204ENST00000641479 1693 ntBASIC15.83■□□□□ 0.13
UBA52P62987 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.83■□□□□ 0.13
UBA52P62987 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.83■□□□□ 0.13
UBA52P62987 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBA52P62987 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.83■□□□□ 0.12
UBA52P62987 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.83■□□□□ 0.12
UBA52P62987 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBA52P62987 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.83■□□□□ 0.12
UBA52P62987 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.83■□□□□ 0.12
UBA52P62987 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBA52P62987 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBA52P62987 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.83■□□□□ 0.12
UBA52P62987 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.83■□□□□ 0.12
UBA52P62987 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.83■□□□□ 0.12
UBA52P62987 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBA52P62987 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
UBA52P62987 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBA52P62987 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBA52P62987 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBA52P62987 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.83■□□□□ 0.12
UBA52P62987 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.83■□□□□ 0.12
UBA52P62987 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBA52P62987 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBA52P62987 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
UBA52P62987 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBA52P62987 PTBP1P-201ENST00000554374 1601 ntBASIC15.83■□□□□ 0.12
UBA52P62987 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.83■□□□□ 0.12
UBA52P62987 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.82■□□□□ 0.12
UBA52P62987 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.82■□□□□ 0.12
UBA52P62987 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.82■□□□□ 0.12
UBA52P62987 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
UBA52P62987 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.82■□□□□ 0.12
UBA52P62987 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
UBA52P62987 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.82■□□□□ 0.12
UBA52P62987 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.82■□□□□ 0.12
UBA52P62987 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.82■□□□□ 0.12
UBA52P62987 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.82■□□□□ 0.12
UBA52P62987 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.82■□□□□ 0.12
UBA52P62987 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
UBA52P62987 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
UBA52P62987 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.82■□□□□ 0.12
UBA52P62987 AL031985.4-201ENST00000642138 673 ntBASIC15.82■□□□□ 0.12
UBA52P62987 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 PCDHA12-202ENST00000613593 2588 ntBASIC15.82■□□□□ 0.12
UBA52P62987 AC084018.2-201ENST00000613093 2607 ntBASIC15.82■□□□□ 0.12
UBA52P62987 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.82■□□□□ 0.12
UBA52P62987 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBA52P62987 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.82■□□□□ 0.12
UBA52P62987 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms