Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SEC61A1P61619 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SEC61A1P61619 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SEC61A1P61619 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.07■□□□□ 0.16
SEC61A1P61619 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.07■□□□□ 0.16
SEC61A1P61619 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.07■□□□□ 0.16
SEC61A1P61619 AC008764.6-201ENST00000595909 2069 ntBASIC16.07■□□□□ 0.16
SEC61A1P61619 AC141586.5-201ENST00000624546 2050 ntBASIC16.07■□□□□ 0.16
SEC61A1P61619 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SEC61A1P61619 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC61A1P61619 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SEC61A1P61619 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC61A1P61619 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.07■□□□□ 0.16
SEC61A1P61619 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC61A1P61619 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC61A1P61619 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.07■□□□□ 0.16
SEC61A1P61619 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SEC61A1P61619 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.07■□□□□ 0.16
SEC61A1P61619 Z85996.1-201ENST00000494644 937 ntBASIC16.07■□□□□ 0.16
SEC61A1P61619 FITM1-202ENST00000559294 800 ntBASIC16.07■□□□□ 0.16
SEC61A1P61619 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.07■□□□□ 0.16
SEC61A1P61619 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.07■□□□□ 0.16
SEC61A1P61619 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.07■□□□□ 0.16
SEC61A1P61619 AC012306.2-201ENST00000609350 630 ntBASIC16.07■□□□□ 0.16
SEC61A1P61619 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.07■□□□□ 0.16
SEC61A1P61619 AC011298.2-201ENST00000617989 482 ntBASIC16.07■□□□□ 0.16
SEC61A1P61619 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.07■□□□□ 0.16
SEC61A1P61619 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.07■□□□□ 0.16
SEC61A1P61619 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC61A1P61619 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC61A1P61619 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC61A1P61619 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC61A1P61619 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SEC61A1P61619 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC61A1P61619 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SEC61A1P61619 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC61A1P61619 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.07■□□□□ 0.16
SEC61A1P61619 SDHAP1-207ENST00000440850 2000 ntBASIC16.07■□□□□ 0.16
SEC61A1P61619 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC61A1P61619 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
SEC61A1P61619 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
SEC61A1P61619 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC61A1P61619 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
SEC61A1P61619 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC61A1P61619 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC61A1P61619 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SEC61A1P61619 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
SEC61A1P61619 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SEC61A1P61619 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC61A1P61619 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SEC61A1P61619 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.06■□□□□ 0.16
SEC61A1P61619 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.06■□□□□ 0.16
SEC61A1P61619 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SEC61A1P61619 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.06■□□□□ 0.16
SEC61A1P61619 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.06■□□□□ 0.16
SEC61A1P61619 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.06■□□□□ 0.16
SEC61A1P61619 ESPNP-201ENST00000270691 2015 ntBASIC16.06■□□□□ 0.16
SEC61A1P61619 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SEC61A1P61619 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC61A1P61619 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SEC61A1P61619 AC104417.2-201ENST00000562989 1793 ntBASIC16.06■□□□□ 0.16
SEC61A1P61619 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC61A1P61619 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC61A1P61619 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.06■□□□□ 0.16
SEC61A1P61619 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.06■□□□□ 0.16
SEC61A1P61619 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.06■□□□□ 0.16
SEC61A1P61619 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC61A1P61619 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC61A1P61619 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC61A1P61619 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC61A1P61619 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
SEC61A1P61619 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.06■□□□□ 0.16
SEC61A1P61619 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC61A1P61619 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SEC61A1P61619 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.06■□□□□ 0.16
SEC61A1P61619 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.06■□□□□ 0.16
SEC61A1P61619 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.06■□□□□ 0.16
SEC61A1P61619 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.06■□□□□ 0.16
SEC61A1P61619 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC61A1P61619 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.06■□□□□ 0.16
SEC61A1P61619 AL160286.2-201ENST00000567150 934 ntBASIC16.06■□□□□ 0.16
SEC61A1P61619 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.06■□□□□ 0.16
SEC61A1P61619 AC097493.4-201ENST00000641197 219 ntBASIC16.06■□□□□ 0.16
SEC61A1P61619 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC61A1P61619 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC61A1P61619 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SEC61A1P61619 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.06■□□□□ 0.16
SEC61A1P61619 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC61A1P61619 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC61A1P61619 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SEC61A1P61619 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SEC61A1P61619 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.05■□□□□ 0.16
SEC61A1P61619 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SEC61A1P61619 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEC61A1P61619 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEC61A1P61619 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.05■□□□□ 0.16
SEC61A1P61619 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEC61A1P61619 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEC61A1P61619 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SEC61A1P61619 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms