Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB5BP61020 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB5BP61020 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
RAB5BP61020 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB5BP61020 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAB5BP61020 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB5BP61020 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB5BP61020 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RAB5BP61020 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RAB5BP61020 AP005435.1-201ENST00000529293 1178 ntBASIC14.39□□□□□ -0.11
RAB5BP61020 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB5BP61020 AC083906.6-201ENST00000641366 219 ntBASIC14.39□□□□□ -0.11
RAB5BP61020 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
RAB5BP61020 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.39□□□□□ -0.11
RAB5BP61020 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB5BP61020 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RAB5BP61020 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB5BP61020 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 AC022188.1-201ENST00000620960 1664 ntBASIC14.39□□□□□ -0.11
RAB5BP61020 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAB5BP61020 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB5BP61020 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB5BP61020 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB5BP61020 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5BP61020 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5BP61020 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB5BP61020 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB5BP61020 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB5BP61020 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5BP61020 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
RAB5BP61020 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5BP61020 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB5BP61020 AC006455.2-201ENST00000429931 906 ntBASIC14.38□□□□□ -0.11
RAB5BP61020 BX664725.1-201ENST00000438252 379 ntBASIC14.38□□□□□ -0.11
RAB5BP61020 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
RAB5BP61020 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RAB5BP61020 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RAB5BP61020 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB5BP61020 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RAB5BP61020 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB5BP61020 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5BP61020 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5BP61020 AC007950.2-201ENST00000615045 2347 ntBASIC14.38□□□□□ -0.11
RAB5BP61020 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5BP61020 SBF1P1-201ENST00000444527 5631 ntBASIC14.38□□□□□ -0.11
RAB5BP61020 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5BP61020 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAB5BP61020 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB5BP61020 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB5BP61020 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RAB5BP61020 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5BP61020 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5BP61020 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.38□□□□□ -0.11
RAB5BP61020 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5BP61020 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5BP61020 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5BP61020 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.38□□□□□ -0.11
RAB5BP61020 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAB5BP61020 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB5BP61020 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RAB5BP61020 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5BP61020 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5BP61020 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB5BP61020 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5BP61020 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5BP61020 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5BP61020 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5BP61020 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAB5BP61020 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RAB5BP61020 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB5BP61020 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB5BP61020 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5BP61020 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB5BP61020 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5BP61020 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5BP61020 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5BP61020 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5BP61020 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5BP61020 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5BP61020 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms