Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.77■□□□□ 0.12
AP3S2P59780 LSM12P1-201ENST00000411836 588 ntBASIC15.77■□□□□ 0.12
AP3S2P59780 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP3S2P59780 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
AP3S2P59780 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
AP3S2P59780 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3S2P59780 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
AP3S2P59780 OR10C1-204ENST00000622521 1039 ntBASIC15.77■□□□□ 0.12
AP3S2P59780 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
AP3S2P59780 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.77■□□□□ 0.12
AP3S2P59780 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.77■□□□□ 0.11
AP3S2P59780 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.77■□□□□ 0.11
AP3S2P59780 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3S2P59780 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3S2P59780 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3S2P59780 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3S2P59780 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
AP3S2P59780 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.11
AP3S2P59780 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
AP3S2P59780 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3S2P59780 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3S2P59780 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.77■□□□□ 0.11
AP3S2P59780 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
AP3S2P59780 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
AP3S2P59780 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.77■□□□□ 0.11
AP3S2P59780 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.77■□□□□ 0.11
AP3S2P59780 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
AP3S2P59780 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
AP3S2P59780 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
AP3S2P59780 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.76■□□□□ 0.11
AP3S2P59780 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.76■□□□□ 0.11
AP3S2P59780 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.76■□□□□ 0.11
AP3S2P59780 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
AP3S2P59780 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.76■□□□□ 0.11
AP3S2P59780 NALT1-201ENST00000429224 738 ntTSL 5 BASIC15.76■□□□□ 0.11
AP3S2P59780 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.76■□□□□ 0.11
AP3S2P59780 CNN2P6-201ENST00000439038 900 ntBASIC15.76■□□□□ 0.11
AP3S2P59780 RPS2P52-201ENST00000469610 820 ntBASIC15.76■□□□□ 0.11
AP3S2P59780 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.76■□□□□ 0.11
AP3S2P59780 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.76■□□□□ 0.11
AP3S2P59780 KRT18P61-201ENST00000585825 1298 ntBASIC15.76■□□□□ 0.11
AP3S2P59780 AC005181.1-201ENST00000604782 1256 ntBASIC15.76■□□□□ 0.11
AP3S2P59780 AC131212.1-201ENST00000613771 668 ntBASIC15.76■□□□□ 0.11
AP3S2P59780 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
AP3S2P59780 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
AP3S2P59780 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
AP3S2P59780 PP12613-201ENST00000424958 2230 ntBASIC15.76■□□□□ 0.11
AP3S2P59780 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 KRT8P32-201ENST00000512863 1461 ntBASIC15.76■□□□□ 0.11
AP3S2P59780 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.76■□□□□ 0.11
AP3S2P59780 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
AP3S2P59780 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
AP3S2P59780 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S2P59780 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S2P59780 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
AP3S2P59780 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S2P59780 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC15.75■□□□□ 0.11
AP3S2P59780 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S2P59780 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
AP3S2P59780 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S2P59780 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.75■□□□□ 0.11
AP3S2P59780 AC006116.8-202ENST00000587620 1550 ntBASIC15.75■□□□□ 0.11
AP3S2P59780 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S2P59780 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S2P59780 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S2P59780 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S2P59780 AP001094.4-201ENST00000579008 2176 ntBASIC15.75■□□□□ 0.11
AP3S2P59780 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S2P59780 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
AP3S2P59780 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
AP3S2P59780 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.75■□□□□ 0.11
AP3S2P59780 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
AP3S2P59780 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.75■□□□□ 0.11
AP3S2P59780 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
AP3S2P59780 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.75■□□□□ 0.11
AP3S2P59780 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.75■□□□□ 0.11
AP3S2P59780 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S2P59780 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.75■□□□□ 0.11
AP3S2P59780 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S2P59780 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.75■□□□□ 0.11
AP3S2P59780 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
AP3S2P59780 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms