Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.77■□□□□ 0.27
HMGA2P52926 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
HMGA2P52926 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
HMGA2P52926 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGA2P52926 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGA2P52926 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGA2P52926 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGA2P52926 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGA2P52926 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGA2P52926 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.76■□□□□ 0.27
HMGA2P52926 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMGA2P52926 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMGA2P52926 HLA-L-209ENST00000420110 1011 ntBASIC16.76■□□□□ 0.27
HMGA2P52926 AC090192.1-201ENST00000517740 490 ntBASIC16.76■□□□□ 0.27
HMGA2P52926 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.76■□□□□ 0.27
HMGA2P52926 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.76■□□□□ 0.27
HMGA2P52926 MIR3180-5-201ENST00000583743 153 ntBASIC16.76■□□□□ 0.27
HMGA2P52926 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.76■□□□□ 0.27
HMGA2P52926 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMGA2P52926 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGA2P52926 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMGA2P52926 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGA2P52926 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGA2P52926 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
HMGA2P52926 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGA2P52926 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.76■□□□□ 0.27
HMGA2P52926 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMGA2P52926 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
HMGA2P52926 AC009053.2-201ENST00000563701 2365 ntBASIC16.75■□□□□ 0.27
HMGA2P52926 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
HMGA2P52926 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGA2P52926 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HMGA2P52926 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HMGA2P52926 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HMGA2P52926 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGA2P52926 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGA2P52926 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGA2P52926 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGA2P52926 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGA2P52926 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
HMGA2P52926 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGA2P52926 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGA2P52926 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGA2P52926 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGA2P52926 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGA2P52926 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HMGA2P52926 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGA2P52926 KRT8P7-201ENST00000533003 1432 ntBASIC16.75■□□□□ 0.27
HMGA2P52926 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HMGA2P52926 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGA2P52926 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGA2P52926 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGA2P52926 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HMGA2P52926 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGA2P52926 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGA2P52926 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.75■□□□□ 0.27
HMGA2P52926 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGA2P52926 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGA2P52926 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGA2P52926 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGA2P52926 AC141586.5-201ENST00000624546 2050 ntBASIC16.74■□□□□ 0.27
HMGA2P52926 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGA2P52926 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGA2P52926 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGA2P52926 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGA2P52926 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGA2P52926 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGA2P52926 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGA2P52926 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGA2P52926 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGA2P52926 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HMGA2P52926 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGA2P52926 KRT18P6-201ENST00000555540 1265 ntBASIC16.74■□□□□ 0.27
HMGA2P52926 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.74■□□□□ 0.27
HMGA2P52926 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGA2P52926 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGA2P52926 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGA2P52926 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HMGA2P52926 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGA2P52926 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGA2P52926 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.74■□□□□ 0.27
HMGA2P52926 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGA2P52926 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.74■□□□□ 0.27
HMGA2P52926 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.74■□□□□ 0.27
HMGA2P52926 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGA2P52926 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
HMGA2P52926 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HMGA2P52926 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
HMGA2P52926 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGA2P52926 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.73■□□□□ 0.27
HMGA2P52926 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HMGA2P52926 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMGA2P52926 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGA2P52926 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGA2P52926 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGA2P52926 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGA2P52926 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGA2P52926 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGA2P52926 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGA2P52926 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms