Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDR1P51861 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.07■□□□□ 0.8
CDR1P51861 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.07■□□□□ 0.8
CDR1P51861 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDR1P51861 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.07■□□□□ 0.8
CDR1P51861 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDR1P51861 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CDR1P51861 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CDR1P51861 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.07■□□□□ 0.8
CDR1P51861 AC036111.1-201ENST00000533973 1582 ntBASIC20.07■□□□□ 0.8
CDR1P51861 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDR1P51861 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.07■□□□□ 0.8
CDR1P51861 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CDR1P51861 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CDR1P51861 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.07■□□□□ 0.8
CDR1P51861 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDR1P51861 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.06■□□□□ 0.8
CDR1P51861 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDR1P51861 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR1P51861 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR1P51861 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDR1P51861 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR1P51861 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR1P51861 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR1P51861 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR1P51861 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR1P51861 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR1P51861 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR1P51861 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR1P51861 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR1P51861 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDR1P51861 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.06■□□□□ 0.8
CDR1P51861 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.06■□□□□ 0.8
CDR1P51861 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR1P51861 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.06■□□□□ 0.8
CDR1P51861 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CDR1P51861 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CDR1P51861 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR1P51861 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDR1P51861 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDR1P51861 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.06■□□□□ 0.8
CDR1P51861 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR1P51861 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDR1P51861 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.06■□□□□ 0.8
CDR1P51861 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDR1P51861 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CDR1P51861 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDR1P51861 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDR1P51861 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDR1P51861 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CDR1P51861 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CDR1P51861 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
CDR1P51861 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDR1P51861 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CDR1P51861 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDR1P51861 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CDR1P51861 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.05■□□□□ 0.8
CDR1P51861 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDR1P51861 RNF152P1-201ENST00000397754 604 ntBASIC20.05■□□□□ 0.8
CDR1P51861 TSPY5P-201ENST00000426936 936 ntBASIC20.05■□□□□ 0.8
CDR1P51861 KRT18P38-201ENST00000449496 1282 ntBASIC20.05■□□□□ 0.8
CDR1P51861 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.05■□□□□ 0.8
CDR1P51861 AC063952.2-201ENST00000498792 1227 ntBASIC20.05■□□□□ 0.8
CDR1P51861 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.05■□□□□ 0.8
CDR1P51861 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
CDR1P51861 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CDR1P51861 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CDR1P51861 AC140113.3-201ENST00000605663 199 ntBASIC20.05■□□□□ 0.8
CDR1P51861 CR769767.2-201ENST00000622735 460 ntBASIC20.05■□□□□ 0.8
CDR1P51861 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.05■□□□□ 0.8
CDR1P51861 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.05■□□□□ 0.8
CDR1P51861 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDR1P51861 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDR1P51861 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CDR1P51861 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDR1P51861 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.05■□□□□ 0.8
CDR1P51861 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.05■□□□□ 0.8
CDR1P51861 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDR1P51861 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.04■□□□□ 0.8
CDR1P51861 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDR1P51861 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDR1P51861 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
CDR1P51861 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDR1P51861 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDR1P51861 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.04■□□□□ 0.8
CDR1P51861 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.04■□□□□ 0.8
CDR1P51861 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CDR1P51861 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDR1P51861 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.04■□□□□ 0.8
CDR1P51861 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDR1P51861 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CDR1P51861 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.04■□□□□ 0.8
CDR1P51861 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDR1P51861 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDR1P51861 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.04■□□□□ 0.8
CDR1P51861 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CDR1P51861 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.04■□□□□ 0.8
CDR1P51861 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.04■□□□□ 0.8
CDR1P51861 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDR1P51861 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms