Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
USP11P51784 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
USP11P51784 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP11P51784 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP11P51784 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP11P51784 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP11P51784 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
USP11P51784 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP11P51784 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.7■□□□□ 0.9
USP11P51784 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.7■□□□□ 0.9
USP11P51784 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.7■□□□□ 0.9
USP11P51784 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.7■□□□□ 0.9
USP11P51784 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.7■□□□□ 0.9
USP11P51784 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP11P51784 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP11P51784 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.7■□□□□ 0.9
USP11P51784 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.7■□□□□ 0.9
USP11P51784 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.7■□□□□ 0.9
USP11P51784 AC005332.3-201ENST00000589904 676 ntBASIC20.7■□□□□ 0.9
USP11P51784 GPR32P1-201ENST00000601788 811 ntBASIC20.7■□□□□ 0.9
USP11P51784 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.7■□□□□ 0.9
USP11P51784 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
USP11P51784 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.7■□□□□ 0.9
USP11P51784 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP11P51784 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP11P51784 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP11P51784 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.7■□□□□ 0.9
USP11P51784 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.7■□□□□ 0.9
USP11P51784 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP11P51784 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP11P51784 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
USP11P51784 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.69■□□□□ 0.9
USP11P51784 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP11P51784 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP11P51784 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
USP11P51784 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP11P51784 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.69■□□□□ 0.9
USP11P51784 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP11P51784 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP11P51784 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.69■□□□□ 0.9
USP11P51784 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.69■□□□□ 0.9
USP11P51784 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP11P51784 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.69■□□□□ 0.9
USP11P51784 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
USP11P51784 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP11P51784 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
USP11P51784 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.69■□□□□ 0.9
USP11P51784 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.69■□□□□ 0.9
USP11P51784 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP11P51784 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP11P51784 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP11P51784 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP11P51784 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
USP11P51784 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP11P51784 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
USP11P51784 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.69■□□□□ 0.9
USP11P51784 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP11P51784 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP11P51784 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP11P51784 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
USP11P51784 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.68■□□□□ 0.9
USP11P51784 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.68■□□□□ 0.9
USP11P51784 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
USP11P51784 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP11P51784 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP11P51784 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP11P51784 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP11P51784 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
USP11P51784 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.68■□□□□ 0.9
USP11P51784 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP11P51784 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.68■□□□□ 0.9
USP11P51784 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.68■□□□□ 0.9
USP11P51784 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.68■□□□□ 0.9
USP11P51784 AL390719.2-201ENST00000606993 987 ntBASIC20.68■□□□□ 0.9
USP11P51784 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.68■□□□□ 0.9
USP11P51784 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
USP11P51784 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.68■□□□□ 0.9
USP11P51784 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.68■□□□□ 0.9
USP11P51784 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
USP11P51784 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.68■□□□□ 0.9
USP11P51784 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP11P51784 AC009113.1-201ENST00000570267 2443 ntBASIC20.68■□□□□ 0.9
USP11P51784 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP11P51784 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP11P51784 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP11P51784 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP11P51784 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
USP11P51784 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP11P51784 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP11P51784 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP11P51784 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP11P51784 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP11P51784 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.67■□□□□ 0.9
USP11P51784 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.67■□□□□ 0.9
USP11P51784 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.67■□□□□ 0.9
USP11P51784 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
USP11P51784 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP11P51784 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.67■□□□□ 0.9
USP11P51784 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
USP11P51784 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms