Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LHX2P50458 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.35■□□□□ 0.21
LHX2P50458 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.35■□□□□ 0.21
LHX2P50458 TPSP2-201ENST00000561760 610 ntBASIC16.35■□□□□ 0.21
LHX2P50458 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.35■□□□□ 0.21
LHX2P50458 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.35■□□□□ 0.21
LHX2P50458 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.35■□□□□ 0.21
LHX2P50458 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.35■□□□□ 0.21
LHX2P50458 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.35■□□□□ 0.21
LHX2P50458 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.35■□□□□ 0.21
LHX2P50458 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LHX2P50458 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LHX2P50458 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.35■□□□□ 0.21
LHX2P50458 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LHX2P50458 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LHX2P50458 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LHX2P50458 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
LHX2P50458 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LHX2P50458 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LHX2P50458 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.35■□□□□ 0.21
LHX2P50458 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LHX2P50458 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LHX2P50458 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
LHX2P50458 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LHX2P50458 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LHX2P50458 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LHX2P50458 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LHX2P50458 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LHX2P50458 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LHX2P50458 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.34■□□□□ 0.21
LHX2P50458 RN7SL606P-201ENST00000472779 293 ntBASIC16.34■□□□□ 0.21
LHX2P50458 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LHX2P50458 GUSBP12-201ENST00000513727 720 ntBASIC16.34■□□□□ 0.21
LHX2P50458 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LHX2P50458 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.34■□□□□ 0.21
LHX2P50458 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
LHX2P50458 CLEC4GP1-201ENST00000596555 870 ntBASIC16.34■□□□□ 0.21
LHX2P50458 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.34■□□□□ 0.21
LHX2P50458 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LHX2P50458 AL592071.1-201ENST00000611956 408 ntBASIC16.34■□□□□ 0.21
LHX2P50458 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.34■□□□□ 0.21
LHX2P50458 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.34■□□□□ 0.21
LHX2P50458 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.34■□□□□ 0.21
LHX2P50458 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LHX2P50458 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LHX2P50458 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LHX2P50458 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LHX2P50458 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LHX2P50458 GMCL1P1-201ENST00000463439 1581 ntBASIC16.34■□□□□ 0.21
LHX2P50458 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LHX2P50458 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LHX2P50458 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LHX2P50458 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.33■□□□□ 0.21
LHX2P50458 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LHX2P50458 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
LHX2P50458 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX2P50458 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX2P50458 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX2P50458 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX2P50458 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX2P50458 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LHX2P50458 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.33■□□□□ 0.2
LHX2P50458 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LHX2P50458 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.33■□□□□ 0.2
LHX2P50458 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
LHX2P50458 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX2P50458 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX2P50458 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.33■□□□□ 0.2
LHX2P50458 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX2P50458 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX2P50458 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX2P50458 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LHX2P50458 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.33■□□□□ 0.2
LHX2P50458 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX2P50458 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.33■□□□□ 0.2
LHX2P50458 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.33■□□□□ 0.2
LHX2P50458 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.33■□□□□ 0.2
LHX2P50458 AC124864.1-201ENST00000623408 392 ntBASIC16.33■□□□□ 0.2
LHX2P50458 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
LHX2P50458 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX2P50458 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
LHX2P50458 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX2P50458 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX2P50458 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX2P50458 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LHX2P50458 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LHX2P50458 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX2P50458 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LHX2P50458 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.33■□□□□ 0.2
LHX2P50458 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LHX2P50458 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LHX2P50458 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX2P50458 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX2P50458 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX2P50458 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX2P50458 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX2P50458 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.32■□□□□ 0.2
LHX2P50458 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX2P50458 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX2P50458 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms