Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP13P45452 AC134043.2-201ENST00000624206 2238 ntBASIC19.09■□□□□ 0.65
MMP13P45452 MTMR9LP-203ENST00000426597 1545 ntBASIC19.09■□□□□ 0.65
MMP13P45452 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.09■□□□□ 0.65
MMP13P45452 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP13P45452 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.09■□□□□ 0.65
MMP13P45452 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MMP13P45452 AC012313.1-201ENST00000593393 3059 ntBASIC19.09■□□□□ 0.65
MMP13P45452 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
MMP13P45452 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP13P45452 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.09■□□□□ 0.65
MMP13P45452 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.09■□□□□ 0.65
MMP13P45452 AC008556.1-201ENST00000610908 2040 ntBASIC19.08■□□□□ 0.65
MMP13P45452 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
MMP13P45452 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
MMP13P45452 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MMP13P45452 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MMP13P45452 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.08■□□□□ 0.65
MMP13P45452 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
MMP13P45452 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.08■□□□□ 0.65
MMP13P45452 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
MMP13P45452 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.08■□□□□ 0.65
MMP13P45452 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MMP13P45452 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
MMP13P45452 GNAS-203ENST00000306120 1878 ntBASIC19.08■□□□□ 0.65
MMP13P45452 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MMP13P45452 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.08■□□□□ 0.65
MMP13P45452 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MMP13P45452 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP13P45452 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP13P45452 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.08■□□□□ 0.64
MMP13P45452 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP13P45452 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP13P45452 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MMP13P45452 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.08■□□□□ 0.64
MMP13P45452 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MMP13P45452 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP13P45452 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MMP13P45452 ECEL1P2-202ENST00000465689 757 ntBASIC19.08■□□□□ 0.64
MMP13P45452 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
MMP13P45452 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP13P45452 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.08■□□□□ 0.64
MMP13P45452 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
MMP13P45452 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
MMP13P45452 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
MMP13P45452 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP13P45452 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.08■□□□□ 0.64
MMP13P45452 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.08■□□□□ 0.64
MMP13P45452 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.64
MMP13P45452 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
MMP13P45452 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.08■□□□□ 0.64
MMP13P45452 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MMP13P45452 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
MMP13P45452 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
MMP13P45452 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MMP13P45452 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP13P45452 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP13P45452 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.07■□□□□ 0.64
MMP13P45452 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MMP13P45452 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
MMP13P45452 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
MMP13P45452 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.07■□□□□ 0.64
MMP13P45452 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP13P45452 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.07■□□□□ 0.64
MMP13P45452 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.07■□□□□ 0.64
MMP13P45452 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.07■□□□□ 0.64
MMP13P45452 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
MMP13P45452 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
MMP13P45452 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
MMP13P45452 AC145285.6-201ENST00000604632 637 ntBASIC19.07■□□□□ 0.64
MMP13P45452 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
MMP13P45452 AC133561.5-201ENST00000635547 218 ntBASIC19.07■□□□□ 0.64
MMP13P45452 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.07■□□□□ 0.64
MMP13P45452 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
MMP13P45452 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
MMP13P45452 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MMP13P45452 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
MMP13P45452 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP13P45452 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MMP13P45452 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
MMP13P45452 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
MMP13P45452 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.06■□□□□ 0.64
MMP13P45452 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MMP13P45452 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MMP13P45452 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MMP13P45452 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
MMP13P45452 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.06■□□□□ 0.64
MMP13P45452 KRT18P22-201ENST00000402024 1347 ntBASIC19.06■□□□□ 0.64
MMP13P45452 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MMP13P45452 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MMP13P45452 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
MMP13P45452 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.06■□□□□ 0.64
MMP13P45452 FAM87A-204ENST00000613235 858 ntBASIC19.06■□□□□ 0.64
MMP13P45452 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.06■□□□□ 0.64
MMP13P45452 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.06■□□□□ 0.64
MMP13P45452 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
MMP13P45452 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
MMP13P45452 AC009053.2-201ENST00000563701 2365 ntBASIC19.06■□□□□ 0.64
MMP13P45452 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
MMP13P45452 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms