Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.98■□□□□ 0.63
PTPN7P35236 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.98■□□□□ 0.63
PTPN7P35236 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.98■□□□□ 0.63
PTPN7P35236 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN7P35236 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.98■□□□□ 0.63
PTPN7P35236 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.98■□□□□ 0.63
PTPN7P35236 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.98■□□□□ 0.63
PTPN7P35236 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.98■□□□□ 0.63
PTPN7P35236 AC112497.1-201ENST00000624824 639 ntBASIC18.98■□□□□ 0.63
PTPN7P35236 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.98■□□□□ 0.63
PTPN7P35236 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN7P35236 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
PTPN7P35236 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PTPN7P35236 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN7P35236 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN7P35236 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PTPN7P35236 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN7P35236 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN7P35236 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPN7P35236 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.98■□□□□ 0.63
PTPN7P35236 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.97■□□□□ 0.63
PTPN7P35236 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN7P35236 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN7P35236 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN7P35236 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN7P35236 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PTPN7P35236 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN7P35236 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN7P35236 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN7P35236 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.97■□□□□ 0.63
PTPN7P35236 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN7P35236 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.97■□□□□ 0.63
PTPN7P35236 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN7P35236 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.97■□□□□ 0.63
PTPN7P35236 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.97■□□□□ 0.63
PTPN7P35236 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PTPN7P35236 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN7P35236 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN7P35236 AL390955.1-201ENST00000428694 934 ntBASIC18.97■□□□□ 0.63
PTPN7P35236 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN7P35236 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.97■□□□□ 0.63
PTPN7P35236 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.97■□□□□ 0.63
PTPN7P35236 C2orf69P3-201ENST00000565542 1120 ntBASIC18.97■□□□□ 0.63
PTPN7P35236 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PTPN7P35236 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN7P35236 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.97■□□□□ 0.63
PTPN7P35236 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.97■□□□□ 0.63
PTPN7P35236 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN7P35236 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN7P35236 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.97■□□□□ 0.63
PTPN7P35236 AC134043.2-201ENST00000624206 2238 ntBASIC18.97■□□□□ 0.63
PTPN7P35236 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN7P35236 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.97■□□□□ 0.63
PTPN7P35236 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN7P35236 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN7P35236 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN7P35236 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.97■□□□□ 0.63
PTPN7P35236 LINC01126-201ENST00000623515 1646 ntBASIC18.96■□□□□ 0.63
PTPN7P35236 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPN7P35236 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPN7P35236 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PTPN7P35236 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PTPN7P35236 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.96■□□□□ 0.63
PTPN7P35236 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PTPN7P35236 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.96■□□□□ 0.63
PTPN7P35236 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.96■□□□□ 0.63
PTPN7P35236 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPN7P35236 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PTPN7P35236 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.96■□□□□ 0.63
PTPN7P35236 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPN7P35236 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 AL024508.2-201ENST00000607749 1894 ntBASIC18.96■□□□□ 0.63
PTPN7P35236 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.96■□□□□ 0.63
PTPN7P35236 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
PTPN7P35236 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN7P35236 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPN7P35236 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN7P35236 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN7P35236 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PTPN7P35236 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms