Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.51□□□□□ -0.25
CKS2P33552 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
CKS2P33552 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CKS2P33552 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.51□□□□□ -0.25
CKS2P33552 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.51□□□□□ -0.25
CKS2P33552 MTMR9LP-203ENST00000426597 1545 ntBASIC13.51□□□□□ -0.25
CKS2P33552 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
CKS2P33552 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
CKS2P33552 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.51□□□□□ -0.25
CKS2P33552 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC13.51□□□□□ -0.25
CKS2P33552 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
CKS2P33552 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.51□□□□□ -0.25
CKS2P33552 KRT18P16-201ENST00000510337 1294 ntBASIC13.51□□□□□ -0.25
CKS2P33552 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.51□□□□□ -0.25
CKS2P33552 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 AC005181.1-201ENST00000604782 1256 ntBASIC13.51□□□□□ -0.25
CKS2P33552 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CKS2P33552 AL121906.2-201ENST00000621597 723 ntBASIC13.51□□□□□ -0.25
CKS2P33552 OR10C1-204ENST00000622521 1039 ntBASIC13.51□□□□□ -0.25
CKS2P33552 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.51□□□□□ -0.25
CKS2P33552 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CKS2P33552 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CKS2P33552 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.51□□□□□ -0.25
CKS2P33552 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CKS2P33552 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CKS2P33552 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
CKS2P33552 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS2P33552 AC124283.5-201ENST00000624661 1809 ntBASIC13.5□□□□□ -0.25
CKS2P33552 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS2P33552 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.5□□□□□ -0.25
CKS2P33552 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.5□□□□□ -0.25
CKS2P33552 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CKS2P33552 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CKS2P33552 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.5□□□□□ -0.25
CKS2P33552 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.5□□□□□ -0.25
CKS2P33552 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.5□□□□□ -0.25
CKS2P33552 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CKS2P33552 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.5□□□□□ -0.25
CKS2P33552 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS2P33552 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CKS2P33552 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.5□□□□□ -0.25
CKS2P33552 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC13.5□□□□□ -0.25
CKS2P33552 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CKS2P33552 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS2P33552 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS2P33552 RPS2P52-201ENST00000469610 820 ntBASIC13.5□□□□□ -0.25
CKS2P33552 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.5□□□□□ -0.25
CKS2P33552 AC005829.2-201ENST00000571422 1056 ntBASIC13.5□□□□□ -0.25
CKS2P33552 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
CKS2P33552 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.5□□□□□ -0.25
CKS2P33552 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.5□□□□□ -0.25
CKS2P33552 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.5□□□□□ -0.25
CKS2P33552 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.5□□□□□ -0.25
CKS2P33552 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS2P33552 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
CKS2P33552 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS2P33552 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CKS2P33552 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CKS2P33552 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS2P33552 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CKS2P33552 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CKS2P33552 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.5□□□□□ -0.25
CKS2P33552 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC13.5□□□□□ -0.25
CKS2P33552 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS2P33552 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS2P33552 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC13.5□□□□□ -0.25
CKS2P33552 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CKS2P33552 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.49□□□□□ -0.25
CKS2P33552 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CKS2P33552 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms