Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.89■□□□□ 0.61
ERCC2P18074 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC2P18074 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC2P18074 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC2P18074 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC2P18074 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC2P18074 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC2P18074 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC2P18074 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.89■□□□□ 0.61
ERCC2P18074 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC2P18074 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC2P18074 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC2P18074 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC2P18074 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC2P18074 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC2P18074 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC2P18074 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.88■□□□□ 0.61
ERCC2P18074 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC2P18074 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ERCC2P18074 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
ERCC2P18074 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC2P18074 RASA4DP-201ENST00000460726 1199 ntBASIC18.88■□□□□ 0.61
ERCC2P18074 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.88■□□□□ 0.61
ERCC2P18074 AC034232.1-201ENST00000506026 1064 ntBASIC18.88■□□□□ 0.61
ERCC2P18074 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC2P18074 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ERCC2P18074 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
ERCC2P18074 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.88■□□□□ 0.61
ERCC2P18074 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC2P18074 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC2P18074 LINC01126-201ENST00000623515 1646 ntBASIC18.88■□□□□ 0.61
ERCC2P18074 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC2P18074 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
ERCC2P18074 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC2P18074 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
ERCC2P18074 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
ERCC2P18074 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC2P18074 AL390961.4-201ENST00000623958 2535 ntBASIC18.88■□□□□ 0.61
ERCC2P18074 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC2P18074 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC2P18074 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC2P18074 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC2P18074 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC2P18074 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC2P18074 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC2P18074 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC2P18074 RNF152P1-201ENST00000397754 604 ntBASIC18.87■□□□□ 0.61
ERCC2P18074 AK4P3-201ENST00000418260 669 ntBASIC18.87■□□□□ 0.61
ERCC2P18074 TSPY5P-201ENST00000426936 936 ntBASIC18.87■□□□□ 0.61
ERCC2P18074 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.87■□□□□ 0.61
ERCC2P18074 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC2P18074 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.87■□□□□ 0.61
ERCC2P18074 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.87■□□□□ 0.61
ERCC2P18074 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC2P18074 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.87■□□□□ 0.61
ERCC2P18074 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.87■□□□□ 0.61
ERCC2P18074 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.87■□□□□ 0.61
ERCC2P18074 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.87■□□□□ 0.61
ERCC2P18074 ABALON-201ENST00000629058 1903 ntBASIC18.87■□□□□ 0.61
ERCC2P18074 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
ERCC2P18074 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ERCC2P18074 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.87■□□□□ 0.61
ERCC2P18074 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.86■□□□□ 0.61
ERCC2P18074 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC2P18074 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC2P18074 AL024508.2-201ENST00000607749 1894 ntBASIC18.86■□□□□ 0.61
ERCC2P18074 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.86■□□□□ 0.61
ERCC2P18074 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.86■□□□□ 0.61
ERCC2P18074 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.86■□□□□ 0.61
ERCC2P18074 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC2P18074 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC2P18074 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC2P18074 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.86■□□□□ 0.61
ERCC2P18074 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC2P18074 SPDYE15P-201ENST00000424157 909 ntBASIC18.86■□□□□ 0.61
ERCC2P18074 PVRIG2P-201ENST00000435460 978 ntBASIC18.86■□□□□ 0.61
ERCC2P18074 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.86■□□□□ 0.61
ERCC2P18074 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.86■□□□□ 0.61
ERCC2P18074 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.86■□□□□ 0.61
ERCC2P18074 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC2P18074 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.86■□□□□ 0.61
ERCC2P18074 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC2P18074 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
ERCC2P18074 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ERCC2P18074 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC2P18074 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ERCC2P18074 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC2P18074 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC2P18074 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.85■□□□□ 0.61
ERCC2P18074 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC2P18074 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC2P18074 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC2P18074 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.85■□□□□ 0.61
ERCC2P18074 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC2P18074 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC2P18074 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC2P18074 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC2P18074 AC007613.1-201ENST00000572811 2597 ntBASIC18.85■□□□□ 0.61
ERCC2P18074 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ERCC2P18074 STARP1-201ENST00000397973 869 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms