Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PF4V1P10720 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
PF4V1P10720 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PF4V1P10720 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PF4V1P10720 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PF4V1P10720 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PF4V1P10720 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
PF4V1P10720 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
PF4V1P10720 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.56□□□□□ -0.08
PF4V1P10720 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.55□□□□□ -0.08
PF4V1P10720 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.55□□□□□ -0.08
PF4V1P10720 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.55□□□□□ -0.08
PF4V1P10720 AC018445.3-201ENST00000624177 1945 ntBASIC14.55□□□□□ -0.08
PF4V1P10720 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
PF4V1P10720 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.55□□□□□ -0.08
PF4V1P10720 KRT18P48-201ENST00000434763 852 ntBASIC14.55□□□□□ -0.08
PF4V1P10720 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.55□□□□□ -0.08
PF4V1P10720 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.55□□□□□ -0.08
PF4V1P10720 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.55□□□□□ -0.08
PF4V1P10720 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.55□□□□□ -0.08
PF4V1P10720 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
PF4V1P10720 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.55□□□□□ -0.08
PF4V1P10720 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.55□□□□□ -0.08
PF4V1P10720 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
PF4V1P10720 MTMR9LP-203ENST00000426597 1545 ntBASIC14.55□□□□□ -0.08
PF4V1P10720 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.55□□□□□ -0.08
PF4V1P10720 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.55□□□□□ -0.08
PF4V1P10720 Z98044.1-201ENST00000632503 1764 ntBASIC14.55□□□□□ -0.08
PF4V1P10720 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC14.55□□□□□ -0.08
PF4V1P10720 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PF4V1P10720 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PF4V1P10720 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PF4V1P10720 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.54□□□□□ -0.08
PF4V1P10720 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PF4V1P10720 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.54□□□□□ -0.08
PF4V1P10720 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PF4V1P10720 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PF4V1P10720 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PF4V1P10720 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PF4V1P10720 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PF4V1P10720 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.54□□□□□ -0.08
PF4V1P10720 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PF4V1P10720 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PF4V1P10720 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PF4V1P10720 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.54□□□□□ -0.08
PF4V1P10720 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.54□□□□□ -0.08
PF4V1P10720 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.54□□□□□ -0.08
PF4V1P10720 AL136038.3-201ENST00000561909 1096 ntBASIC14.54□□□□□ -0.08
PF4V1P10720 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
PF4V1P10720 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PF4V1P10720 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.54□□□□□ -0.08
PF4V1P10720 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PF4V1P10720 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PF4V1P10720 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PF4V1P10720 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PF4V1P10720 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PF4V1P10720 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
PF4V1P10720 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PF4V1P10720 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PF4V1P10720 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.54□□□□□ -0.08
PF4V1P10720 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PF4V1P10720 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PF4V1P10720 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PF4V1P10720 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.53□□□□□ -0.08
PF4V1P10720 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PF4V1P10720 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PF4V1P10720 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.53□□□□□ -0.08
PF4V1P10720 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.53□□□□□ -0.08
PF4V1P10720 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PF4V1P10720 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.53□□□□□ -0.08
PF4V1P10720 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PF4V1P10720 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.53□□□□□ -0.08
PF4V1P10720 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PF4V1P10720 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PF4V1P10720 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.53□□□□□ -0.08
PF4V1P10720 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PF4V1P10720 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
PF4V1P10720 SPDYE15P-201ENST00000424157 909 ntBASIC14.53□□□□□ -0.08
PF4V1P10720 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PF4V1P10720 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.53□□□□□ -0.08
PF4V1P10720 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms