Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 NOC2LP2-201ENST00000407594 1944 ntBASIC19.85■□□□□ 0.77
CCDC172P0C7W6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC172P0C7W6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 AC093677.2-201ENST00000600169 1863 ntBASIC19.84■□□□□ 0.77
CCDC172P0C7W6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 MIR718-201ENST00000390190 70 ntBASIC19.84■□□□□ 0.77
CCDC172P0C7W6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 KRT8P7-201ENST00000533003 1432 ntBASIC19.84■□□□□ 0.77
CCDC172P0C7W6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC172P0C7W6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC172P0C7W6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC172P0C7W6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC172P0C7W6 PKD1P1-201ENST00000458669 6805 ntBASIC19.83■□□□□ 0.77
CCDC172P0C7W6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC172P0C7W6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC172P0C7W6 TNRC18P3-201ENST00000441896 2691 ntBASIC19.83■□□□□ 0.77
CCDC172P0C7W6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CCDC172P0C7W6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC172P0C7W6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC172P0C7W6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC172P0C7W6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CCDC172P0C7W6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC172P0C7W6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CCDC172P0C7W6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC172P0C7W6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC172P0C7W6 SLC25A1P2-201ENST00000430693 912 ntBASIC19.83■□□□□ 0.77
CCDC172P0C7W6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC172P0C7W6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC172P0C7W6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC172P0C7W6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC172P0C7W6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CCDC172P0C7W6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.83■□□□□ 0.76
CCDC172P0C7W6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC172P0C7W6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC172P0C7W6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CCDC172P0C7W6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 AC012313.1-201ENST00000593393 3059 ntBASIC19.82■□□□□ 0.76
CCDC172P0C7W6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 UNC93B2-201ENST00000285383 730 ntBASIC19.82■□□□□ 0.76
CCDC172P0C7W6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 TSPY17P-201ENST00000450329 467 ntBASIC19.82■□□□□ 0.76
CCDC172P0C7W6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 KRT8P50-201ENST00000562022 1438 ntBASIC19.82■□□□□ 0.76
CCDC172P0C7W6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC172P0C7W6 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms