Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RBP1P09455 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RBP1P09455 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RBP1P09455 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.11■□□□□ 0.49
RBP1P09455 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RBP1P09455 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RBP1P09455 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.1■□□□□ 0.49
RBP1P09455 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.1■□□□□ 0.49
RBP1P09455 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.1■□□□□ 0.49
RBP1P09455 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.1■□□□□ 0.49
RBP1P09455 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RBP1P09455 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RBP1P09455 AL355355.2-201ENST00000442321 338 ntBASIC18.1■□□□□ 0.49
RBP1P09455 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.1■□□□□ 0.49
RBP1P09455 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.1■□□□□ 0.49
RBP1P09455 REXO1L10P-201ENST00000615707 1290 ntBASIC18.1■□□□□ 0.49
RBP1P09455 REXO1L12P-201ENST00000622156 912 ntBASIC18.1■□□□□ 0.49
RBP1P09455 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
RBP1P09455 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 AC134043.2-201ENST00000624206 2238 ntBASIC18.1■□□□□ 0.49
RBP1P09455 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBP1P09455 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RBP1P09455 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.09■□□□□ 0.49
RBP1P09455 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RBP1P09455 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RBP1P09455 AC036111.1-201ENST00000533973 1582 ntBASIC18.09■□□□□ 0.49
RBP1P09455 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RBP1P09455 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.09■□□□□ 0.49
RBP1P09455 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.09■□□□□ 0.49
RBP1P09455 AC009102.3-201ENST00000623118 1491 ntBASIC18.09■□□□□ 0.49
RBP1P09455 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RBP1P09455 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.09■□□□□ 0.49
RBP1P09455 KRT8P7-201ENST00000533003 1432 ntBASIC18.09■□□□□ 0.49
RBP1P09455 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RBP1P09455 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RBP1P09455 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RBP1P09455 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RBP1P09455 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RBP1P09455 MIR149-201ENST00000384879 89 ntBASIC18.09■□□□□ 0.49
RBP1P09455 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RBP1P09455 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RBP1P09455 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.09■□□□□ 0.49
RBP1P09455 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.09■□□□□ 0.49
RBP1P09455 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.09■□□□□ 0.49
RBP1P09455 AP005242.2-201ENST00000580065 1175 ntBASIC18.09■□□□□ 0.49
RBP1P09455 AL049637.2-201ENST00000641778 930 ntBASIC18.09■□□□□ 0.49
RBP1P09455 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RBP1P09455 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.09■□□□□ 0.49
RBP1P09455 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RBP1P09455 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RBP1P09455 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RBP1P09455 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RBP1P09455 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RBP1P09455 PHGDH-209ENST00000641074 1780 ntBASIC18.09■□□□□ 0.49
RBP1P09455 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
RBP1P09455 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RBP1P09455 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.09■□□□□ 0.49
RBP1P09455 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RBP1P09455 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RBP1P09455 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RBP1P09455 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RBP1P09455 HOXB1-202ENST00000577092 1414 ntBASIC18.08■□□□□ 0.49
RBP1P09455 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RBP1P09455 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RBP1P09455 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
RBP1P09455 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RBP1P09455 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RBP1P09455 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RBP1P09455 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.08■□□□□ 0.48
RBP1P09455 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RBP1P09455 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
RBP1P09455 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RBP1P09455 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RBP1P09455 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RBP1P09455 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.08■□□□□ 0.48
RBP1P09455 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RBP1P09455 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RBP1P09455 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
RBP1P09455 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
RBP1P09455 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms