Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD48P09326 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CD48P09326 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CD48P09326 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CD48P09326 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CD48P09326 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CD48P09326 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
CD48P09326 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD48P09326 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CD48P09326 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CD48P09326 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CD48P09326 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD48P09326 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CD48P09326 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.02■□□□□ 0.64
CD48P09326 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD48P09326 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.02■□□□□ 0.64
CD48P09326 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.02■□□□□ 0.64
CD48P09326 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.02■□□□□ 0.64
CD48P09326 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.02■□□□□ 0.64
CD48P09326 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.02■□□□□ 0.64
CD48P09326 AC010240.3-201ENST00000607688 395 ntBASIC19.02■□□□□ 0.64
CD48P09326 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CD48P09326 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CD48P09326 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.02■□□□□ 0.64
CD48P09326 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD48P09326 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CD48P09326 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CD48P09326 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CD48P09326 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
CD48P09326 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD48P09326 KRT18P22-201ENST00000402024 1347 ntBASIC19.01■□□□□ 0.63
CD48P09326 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CD48P09326 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CD48P09326 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.01■□□□□ 0.63
CD48P09326 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD48P09326 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD48P09326 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD48P09326 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.01■□□□□ 0.63
CD48P09326 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
CD48P09326 ECEL1P3-201ENST00000427961 737 ntBASIC19.01■□□□□ 0.63
CD48P09326 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
CD48P09326 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.01■□□□□ 0.63
CD48P09326 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.01■□□□□ 0.63
CD48P09326 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD48P09326 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CD48P09326 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CD48P09326 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD48P09326 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD48P09326 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.01■□□□□ 0.63
CD48P09326 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.01■□□□□ 0.63
CD48P09326 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD48P09326 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD48P09326 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CD48P09326 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD48P09326 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD48P09326 AC008764.6-201ENST00000595909 2069 ntBASIC19.01■□□□□ 0.63
CD48P09326 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19■□□□□ 0.63
CD48P09326 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD48P09326 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD48P09326 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CD48P09326 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19■□□□□ 0.63
CD48P09326 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD48P09326 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD48P09326 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD48P09326 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19■□□□□ 0.63
CD48P09326 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19■□□□□ 0.63
CD48P09326 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD48P09326 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CD48P09326 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD48P09326 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD48P09326 GRAMD4P1-201ENST00000435181 1110 ntBASIC19■□□□□ 0.63
CD48P09326 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19■□□□□ 0.63
CD48P09326 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CD48P09326 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19■□□□□ 0.63
CD48P09326 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19■□□□□ 0.63
CD48P09326 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD48P09326 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD48P09326 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19■□□□□ 0.63
CD48P09326 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CD48P09326 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19■□□□□ 0.63
CD48P09326 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD48P09326 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19■□□□□ 0.63
CD48P09326 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD48P09326 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CD48P09326 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD48P09326 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CD48P09326 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD48P09326 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD48P09326 AC138028.4-201ENST00000564984 1845 ntBASIC19■□□□□ 0.63
CD48P09326 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CD48P09326 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.99■□□□□ 0.63
CD48P09326 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.99■□□□□ 0.63
CD48P09326 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD48P09326 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CD48P09326 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.99■□□□□ 0.63
CD48P09326 AL024508.2-201ENST00000607749 1894 ntBASIC18.99■□□□□ 0.63
CD48P09326 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CD48P09326 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
CD48P09326 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD48P09326 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms