Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TPM3P06753 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TPM3P06753 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.6■□□□□ 0.89
TPM3P06753 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.6■□□□□ 0.89
TPM3P06753 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TPM3P06753 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TPM3P06753 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TPM3P06753 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TPM3P06753 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TPM3P06753 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TPM3P06753 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TPM3P06753 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TPM3P06753 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TPM3P06753 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.59■□□□□ 0.89
TPM3P06753 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TPM3P06753 KRT8P41-201ENST00000533985 1514 ntBASIC20.59■□□□□ 0.89
TPM3P06753 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
TPM3P06753 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TPM3P06753 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.59■□□□□ 0.89
TPM3P06753 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TPM3P06753 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.59■□□□□ 0.89
TPM3P06753 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TPM3P06753 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TPM3P06753 TSPY6P-201ENST00000448518 926 ntBASIC20.59■□□□□ 0.89
TPM3P06753 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.59■□□□□ 0.89
TPM3P06753 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TPM3P06753 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TPM3P06753 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TPM3P06753 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.59■□□□□ 0.89
TPM3P06753 REXO1L9P-201ENST00000604264 2108 ntBASIC20.59■□□□□ 0.89
TPM3P06753 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TPM3P06753 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TPM3P06753 OR6D1P-203ENST00000641209 4860 ntBASIC20.59■□□□□ 0.89
TPM3P06753 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TPM3P06753 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.58■□□□□ 0.89
TPM3P06753 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TPM3P06753 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.58■□□□□ 0.89
TPM3P06753 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TPM3P06753 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.58■□□□□ 0.89
TPM3P06753 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
TPM3P06753 KRT8P32-201ENST00000512863 1461 ntBASIC20.58■□□□□ 0.89
TPM3P06753 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TPM3P06753 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TPM3P06753 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TPM3P06753 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TPM3P06753 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TPM3P06753 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TPM3P06753 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TPM3P06753 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TPM3P06753 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TPM3P06753 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TPM3P06753 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TPM3P06753 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TPM3P06753 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TPM3P06753 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TPM3P06753 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.58■□□□□ 0.88
TPM3P06753 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TPM3P06753 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TPM3P06753 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
TPM3P06753 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TPM3P06753 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TPM3P06753 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TPM3P06753 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
TPM3P06753 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TPM3P06753 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
TPM3P06753 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TPM3P06753 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
TPM3P06753 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM3P06753 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM3P06753 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.57■□□□□ 0.88
TPM3P06753 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.57■□□□□ 0.88
TPM3P06753 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.57■□□□□ 0.88
TPM3P06753 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.57■□□□□ 0.88
TPM3P06753 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM3P06753 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TPM3P06753 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TPM3P06753 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM3P06753 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
TPM3P06753 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM3P06753 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM3P06753 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.57■□□□□ 0.88
TPM3P06753 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.57■□□□□ 0.88
TPM3P06753 GUSBP6-202ENST00000438529 1198 ntBASIC20.57■□□□□ 0.88
TPM3P06753 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.57■□□□□ 0.88
TPM3P06753 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TPM3P06753 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.57■□□□□ 0.88
TPM3P06753 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TPM3P06753 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.57■□□□□ 0.88
TPM3P06753 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.57■□□□□ 0.88
TPM3P06753 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.57■□□□□ 0.88
TPM3P06753 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.57■□□□□ 0.88
TPM3P06753 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TPM3P06753 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TPM3P06753 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TPM3P06753 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TPM3P06753 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TPM3P06753 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TPM3P06753 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TPM3P06753 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TPM3P06753 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms