Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TOMM40O96008 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TOMM40O96008 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TOMM40O96008 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TOMM40O96008 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TOMM40O96008 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TOMM40O96008 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TOMM40O96008 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.39□□□□□ -0.11
TOMM40O96008 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TOMM40O96008 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TOMM40O96008 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.39□□□□□ -0.11
TOMM40O96008 FAM197Y1-201ENST00000421178 764 ntBASIC14.39□□□□□ -0.11
TOMM40O96008 FAM201B-201ENST00000458407 597 ntBASIC14.39□□□□□ -0.11
TOMM40O96008 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.39□□□□□ -0.11
TOMM40O96008 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TOMM40O96008 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.39□□□□□ -0.11
TOMM40O96008 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.39□□□□□ -0.11
TOMM40O96008 DGCR10-201ENST00000609839 495 ntBASIC14.39□□□□□ -0.11
TOMM40O96008 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TOMM40O96008 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TOMM40O96008 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TOMM40O96008 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TOMM40O96008 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.39□□□□□ -0.11
TOMM40O96008 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TOMM40O96008 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TOMM40O96008 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TOMM40O96008 AC008556.1-201ENST00000610908 2040 ntBASIC14.39□□□□□ -0.11
TOMM40O96008 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.39□□□□□ -0.11
TOMM40O96008 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
TOMM40O96008 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TOMM40O96008 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TOMM40O96008 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TOMM40O96008 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.39□□□□□ -0.11
TOMM40O96008 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TOMM40O96008 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.38□□□□□ -0.11
TOMM40O96008 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TOMM40O96008 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 AC096733.2-201ENST00000609937 1394 ntBASIC14.38□□□□□ -0.11
TOMM40O96008 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
TOMM40O96008 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.38□□□□□ -0.11
TOMM40O96008 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.38□□□□□ -0.11
TOMM40O96008 MESTP1-201ENST00000404287 994 ntBASIC14.38□□□□□ -0.11
TOMM40O96008 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.38□□□□□ -0.11
TOMM40O96008 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.38□□□□□ -0.11
TOMM40O96008 MCCD1P1-208ENST00000445732 328 ntBASIC14.38□□□□□ -0.11
TOMM40O96008 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.38□□□□□ -0.11
TOMM40O96008 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.38□□□□□ -0.11
TOMM40O96008 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TOMM40O96008 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TOMM40O96008 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.38□□□□□ -0.11
TOMM40O96008 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TOMM40O96008 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.38□□□□□ -0.11
TOMM40O96008 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.38□□□□□ -0.11
TOMM40O96008 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 AC008764.6-201ENST00000595909 2069 ntBASIC14.38□□□□□ -0.11
TOMM40O96008 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 AC135776.1-201ENST00000319817 2481 ntBASIC14.38□□□□□ -0.11
TOMM40O96008 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.38□□□□□ -0.11
TOMM40O96008 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TOMM40O96008 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.37□□□□□ -0.11
TOMM40O96008 OR6D1P-202ENST00000641007 5290 ntBASIC14.37□□□□□ -0.11
TOMM40O96008 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TOMM40O96008 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.37□□□□□ -0.11
TOMM40O96008 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TOMM40O96008 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TOMM40O96008 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TOMM40O96008 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.37□□□□□ -0.11
TOMM40O96008 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TOMM40O96008 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TOMM40O96008 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.37□□□□□ -0.11
TOMM40O96008 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TOMM40O96008 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.37□□□□□ -0.11
TOMM40O96008 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.37□□□□□ -0.11
TOMM40O96008 MIR564-202ENST00000385049 94 ntBASIC14.37□□□□□ -0.11
TOMM40O96008 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TOMM40O96008 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TOMM40O96008 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TOMM40O96008 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.37□□□□□ -0.11
TOMM40O96008 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TOMM40O96008 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.37□□□□□ -0.11
TOMM40O96008 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.37□□□□□ -0.11
TOMM40O96008 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.37□□□□□ -0.11
TOMM40O96008 CD177P1-201ENST00000606252 935 ntBASIC14.37□□□□□ -0.11
TOMM40O96008 AC008622.2-201ENST00000617006 1229 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms