Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMC2O95347 AL023284.2-201ENST00000405850 579 ntBASIC20.76■□□□□ 0.91
SMC2O95347 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMC2O95347 MCCD1P1-208ENST00000445732 328 ntBASIC20.76■□□□□ 0.91
SMC2O95347 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SMC2O95347 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SMC2O95347 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.76■□□□□ 0.91
SMC2O95347 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.76■□□□□ 0.91
SMC2O95347 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.76■□□□□ 0.91
SMC2O95347 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.76■□□□□ 0.91
SMC2O95347 SLC25A1P4-201ENST00000567977 778 ntBASIC20.76■□□□□ 0.91
SMC2O95347 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.76■□□□□ 0.91
SMC2O95347 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SMC2O95347 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMC2O95347 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.76■□□□□ 0.91
SMC2O95347 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SMC2O95347 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMC2O95347 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMC2O95347 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.76■□□□□ 0.91
SMC2O95347 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SMC2O95347 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMC2O95347 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMC2O95347 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC2O95347 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC2O95347 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SMC2O95347 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC2O95347 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC2O95347 AC093677.2-201ENST00000600169 1863 ntBASIC20.75■□□□□ 0.91
SMC2O95347 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC2O95347 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC2O95347 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC2O95347 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SMC2O95347 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMC2O95347 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC2O95347 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC2O95347 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.75■□□□□ 0.91
SMC2O95347 MFAP1P1-201ENST00000442257 1255 ntBASIC20.75■□□□□ 0.91
SMC2O95347 AC116562.2-201ENST00000507042 360 ntBASIC20.75■□□□□ 0.91
SMC2O95347 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.75■□□□□ 0.91
SMC2O95347 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.75■□□□□ 0.91
SMC2O95347 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC2O95347 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
SMC2O95347 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC2O95347 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC2O95347 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMC2O95347 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
SMC2O95347 ESPNP-201ENST00000270691 2015 ntBASIC20.75■□□□□ 0.91
SMC2O95347 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SMC2O95347 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMC2O95347 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
SMC2O95347 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.74■□□□□ 0.91
SMC2O95347 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC2O95347 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMC2O95347 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.74■□□□□ 0.91
SMC2O95347 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC2O95347 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMC2O95347 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC2O95347 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC2O95347 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.74■□□□□ 0.91
SMC2O95347 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SMC2O95347 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC2O95347 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMC2O95347 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.74■□□□□ 0.91
SMC2O95347 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.74■□□□□ 0.91
SMC2O95347 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.74■□□□□ 0.91
SMC2O95347 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
SMC2O95347 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SMC2O95347 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC2O95347 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMC2O95347 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SMC2O95347 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMC2O95347 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC2O95347 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMC2O95347 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMC2O95347 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMC2O95347 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.73■□□□□ 0.91
SMC2O95347 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SMC2O95347 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMC2O95347 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMC2O95347 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMC2O95347 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.73■□□□□ 0.91
SMC2O95347 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMC2O95347 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMC2O95347 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMC2O95347 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
SMC2O95347 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMC2O95347 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.73■□□□□ 0.91
SMC2O95347 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.73■□□□□ 0.91
SMC2O95347 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMC2O95347 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMC2O95347 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMC2O95347 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.73■□□□□ 0.91
SMC2O95347 NUDT16P1-203ENST00000513809 620 ntBASIC20.73■□□□□ 0.91
SMC2O95347 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.73■□□□□ 0.91
SMC2O95347 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.73■□□□□ 0.91
SMC2O95347 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMC2O95347 GPAT2P1-201ENST00000444924 1672 ntBASIC20.73■□□□□ 0.91
SMC2O95347 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMC2O95347 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMC2O95347 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms