Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 KRT8P41-201ENST00000533985 1514 ntBASIC16.14■□□□□ 0.18
KDM4BO94953 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
KDM4BO94953 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.14■□□□□ 0.17
KDM4BO94953 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.14■□□□□ 0.17
KDM4BO94953 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
KDM4BO94953 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KDM4BO94953 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KDM4BO94953 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KDM4BO94953 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KDM4BO94953 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.14■□□□□ 0.17
KDM4BO94953 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
KDM4BO94953 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
KDM4BO94953 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KDM4BO94953 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.14■□□□□ 0.17
KDM4BO94953 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.14■□□□□ 0.17
KDM4BO94953 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.14■□□□□ 0.17
KDM4BO94953 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.14■□□□□ 0.17
KDM4BO94953 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KDM4BO94953 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.14■□□□□ 0.17
KDM4BO94953 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KDM4BO94953 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KDM4BO94953 AC009053.2-201ENST00000563701 2365 ntBASIC16.14■□□□□ 0.17
KDM4BO94953 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KDM4BO94953 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KDM4BO94953 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KDM4BO94953 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.14■□□□□ 0.17
KDM4BO94953 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
KDM4BO94953 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
KDM4BO94953 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
KDM4BO94953 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.13■□□□□ 0.17
KDM4BO94953 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.13■□□□□ 0.17
KDM4BO94953 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 OR6D1P-203ENST00000641209 4860 ntBASIC16.13■□□□□ 0.17
KDM4BO94953 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.13■□□□□ 0.17
KDM4BO94953 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.13■□□□□ 0.17
KDM4BO94953 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
KDM4BO94953 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.13■□□□□ 0.17
KDM4BO94953 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
KDM4BO94953 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.13■□□□□ 0.17
KDM4BO94953 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.13■□□□□ 0.17
KDM4BO94953 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
KDM4BO94953 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 AC124016.1-201ENST00000609552 612 ntBASIC16.13■□□□□ 0.17
KDM4BO94953 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.13■□□□□ 0.17
KDM4BO94953 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.13■□□□□ 0.17
KDM4BO94953 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
KDM4BO94953 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
KDM4BO94953 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
KDM4BO94953 AC011270.2-201ENST00000624293 2550 ntBASIC16.13■□□□□ 0.17
KDM4BO94953 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
KDM4BO94953 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
KDM4BO94953 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
KDM4BO94953 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KDM4BO94953 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
KDM4BO94953 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KDM4BO94953 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KDM4BO94953 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.12■□□□□ 0.17
KDM4BO94953 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
KDM4BO94953 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
KDM4BO94953 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KDM4BO94953 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KDM4BO94953 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.12■□□□□ 0.17
KDM4BO94953 Z85996.1-201ENST00000494644 937 ntBASIC16.12■□□□□ 0.17
KDM4BO94953 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.12■□□□□ 0.17
KDM4BO94953 RN7SL471P-201ENST00000580476 299 ntBASIC16.12■□□□□ 0.17
KDM4BO94953 AC110285.5-201ENST00000611501 352 ntBASIC16.12■□□□□ 0.17
KDM4BO94953 AL445675.2-201ENST00000620291 557 ntBASIC16.12■□□□□ 0.17
KDM4BO94953 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.12■□□□□ 0.17
KDM4BO94953 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KDM4BO94953 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KDM4BO94953 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KDM4BO94953 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
KDM4BO94953 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KDM4BO94953 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KDM4BO94953 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.12■□□□□ 0.17
KDM4BO94953 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
KDM4BO94953 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.12■□□□□ 0.17
KDM4BO94953 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KDM4BO94953 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
KDM4BO94953 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
KDM4BO94953 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
KDM4BO94953 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms