Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHL41O60662 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.23■□□□□ 0.51
KLHL41O60662 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.23■□□□□ 0.51
KLHL41O60662 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
KLHL41O60662 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.23■□□□□ 0.51
KLHL41O60662 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
KLHL41O60662 MIR1238-201ENST00000408483 83 ntBASIC18.23■□□□□ 0.51
KLHL41O60662 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.23■□□□□ 0.51
KLHL41O60662 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.23■□□□□ 0.51
KLHL41O60662 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.23■□□□□ 0.51
KLHL41O60662 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.23■□□□□ 0.51
KLHL41O60662 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.23■□□□□ 0.51
KLHL41O60662 DGCR10-201ENST00000609839 495 ntBASIC18.23■□□□□ 0.51
KLHL41O60662 AL445675.2-201ENST00000620291 557 ntBASIC18.23■□□□□ 0.51
KLHL41O60662 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
KLHL41O60662 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.23■□□□□ 0.51
KLHL41O60662 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.23■□□□□ 0.51
KLHL41O60662 MTMR9LP-203ENST00000426597 1545 ntBASIC18.23■□□□□ 0.51
KLHL41O60662 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.23■□□□□ 0.51
KLHL41O60662 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.23■□□□□ 0.51
KLHL41O60662 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL41O60662 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
KLHL41O60662 AC134043.2-201ENST00000624206 2238 ntBASIC18.22■□□□□ 0.51
KLHL41O60662 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KLHL41O60662 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.22■□□□□ 0.51
KLHL41O60662 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KLHL41O60662 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.22■□□□□ 0.51
KLHL41O60662 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.22■□□□□ 0.51
KLHL41O60662 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KLHL41O60662 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.22■□□□□ 0.51
KLHL41O60662 C2orf69P3-201ENST00000565542 1120 ntBASIC18.22■□□□□ 0.51
KLHL41O60662 C1QL1P1-201ENST00000568105 661 ntBASIC18.22■□□□□ 0.51
KLHL41O60662 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.22■□□□□ 0.51
KLHL41O60662 MIR6786-201ENST00000616843 113 ntBASIC18.22■□□□□ 0.51
KLHL41O60662 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.22■□□□□ 0.51
KLHL41O60662 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KLHL41O60662 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
KLHL41O60662 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KLHL41O60662 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
KLHL41O60662 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KLHL41O60662 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.22■□□□□ 0.51
KLHL41O60662 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KLHL41O60662 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
KLHL41O60662 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KLHL41O60662 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KLHL41O60662 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.21■□□□□ 0.51
KLHL41O60662 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KLHL41O60662 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.21■□□□□ 0.51
KLHL41O60662 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KLHL41O60662 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
KLHL41O60662 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KLHL41O60662 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KLHL41O60662 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KLHL41O60662 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.21■□□□□ 0.51
KLHL41O60662 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KLHL41O60662 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KLHL41O60662 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.21■□□□□ 0.51
KLHL41O60662 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KLHL41O60662 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.21■□□□□ 0.51
KLHL41O60662 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
KLHL41O60662 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KLHL41O60662 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KLHL41O60662 AL160286.2-201ENST00000567150 934 ntBASIC18.21■□□□□ 0.51
KLHL41O60662 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.21■□□□□ 0.51
KLHL41O60662 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.21■□□□□ 0.51
KLHL41O60662 AP000525.1-201ENST00000608286 694 ntBASIC18.21■□□□□ 0.51
KLHL41O60662 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
KLHL41O60662 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.21■□□□□ 0.51
KLHL41O60662 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.21■□□□□ 0.51
KLHL41O60662 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.21■□□□□ 0.51
KLHL41O60662 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
KLHL41O60662 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KLHL41O60662 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
KLHL41O60662 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.21■□□□□ 0.51
KLHL41O60662 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KLHL41O60662 RCC2P6-201ENST00000526625 1557 ntBASIC18.21■□□□□ 0.51
KLHL41O60662 AC139713.2-201ENST00000641328 2723 ntBASIC18.21■□□□□ 0.5
KLHL41O60662 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
KLHL41O60662 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KLHL41O60662 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms