Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC28A2O43868 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC28A2O43868 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC28A2O43868 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC28A2O43868 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.69■□□□□ 0.42
SLC28A2O43868 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 AC008040.2-201ENST00000461049 708 ntBASIC17.69■□□□□ 0.42
SLC28A2O43868 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC28A2O43868 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC28A2O43868 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
SLC28A2O43868 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.69■□□□□ 0.42
SLC28A2O43868 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SLC28A2O43868 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SLC28A2O43868 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
SLC28A2O43868 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SLC28A2O43868 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SLC28A2O43868 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC28A2O43868 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC28A2O43868 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC28A2O43868 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC28A2O43868 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SLC28A2O43868 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC28A2O43868 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC28A2O43868 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SLC28A2O43868 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC28A2O43868 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC28A2O43868 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC28A2O43868 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC28A2O43868 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
SLC28A2O43868 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC28A2O43868 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC28A2O43868 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.68■□□□□ 0.42
SLC28A2O43868 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SLC28A2O43868 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC28A2O43868 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.68■□□□□ 0.42
SLC28A2O43868 AL353719.1-201ENST00000566847 864 ntBASIC17.68■□□□□ 0.42
SLC28A2O43868 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC28A2O43868 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC28A2O43868 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC28A2O43868 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SLC28A2O43868 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC28A2O43868 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC28A2O43868 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
SLC28A2O43868 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC28A2O43868 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
SLC28A2O43868 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC28A2O43868 AC009113.1-201ENST00000570267 2443 ntBASIC17.68■□□□□ 0.42
SLC28A2O43868 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC28A2O43868 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SLC28A2O43868 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
SLC28A2O43868 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SLC28A2O43868 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC28A2O43868 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC28A2O43868 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SLC28A2O43868 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC28A2O43868 KRT8P41-201ENST00000533985 1514 ntBASIC17.67■□□□□ 0.42
SLC28A2O43868 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC28A2O43868 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SLC28A2O43868 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC28A2O43868 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC28A2O43868 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC28A2O43868 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC28A2O43868 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC28A2O43868 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC28A2O43868 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC28A2O43868 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC28A2O43868 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC28A2O43868 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC28A2O43868 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC28A2O43868 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC28A2O43868 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC28A2O43868 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC28A2O43868 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC28A2O43868 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SLC28A2O43868 AL023803.3-201ENST00000615559 522 ntBASIC17.67■□□□□ 0.42
SLC28A2O43868 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC28A2O43868 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC28A2O43868 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC28A2O43868 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms