Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.57■□□□□ 0.4
DUX1O43812 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DUX1O43812 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DUX1O43812 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DUX1O43812 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.57■□□□□ 0.4
DUX1O43812 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.57■□□□□ 0.4
DUX1O43812 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.57■□□□□ 0.4
DUX1O43812 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DUX1O43812 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DUX1O43812 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.57■□□□□ 0.4
DUX1O43812 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.57■□□□□ 0.4
DUX1O43812 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.57■□□□□ 0.4
DUX1O43812 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DUX1O43812 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.57■□□□□ 0.4
DUX1O43812 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DUX1O43812 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DUX1O43812 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.57■□□□□ 0.4
DUX1O43812 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DUX1O43812 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DUX1O43812 SDHAP2-201ENST00000455183 2001 ntBASIC17.57■□□□□ 0.4
DUX1O43812 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DUX1O43812 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
DUX1O43812 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
DUX1O43812 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.56■□□□□ 0.4
DUX1O43812 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DUX1O43812 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DUX1O43812 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DUX1O43812 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
DUX1O43812 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
DUX1O43812 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DUX1O43812 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
DUX1O43812 IGHV3-47-201ENST00000425060 335 ntBASIC17.56■□□□□ 0.4
DUX1O43812 MINOS1P3-201ENST00000457048 203 ntBASIC17.56■□□□□ 0.4
DUX1O43812 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.56■□□□□ 0.4
DUX1O43812 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.56■□□□□ 0.4
DUX1O43812 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.56■□□□□ 0.4
DUX1O43812 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.56■□□□□ 0.4
DUX1O43812 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DUX1O43812 NSUN5P1-202ENST00000421140 1535 ntBASIC17.56■□□□□ 0.4
DUX1O43812 NSUN5P2-203ENST00000457352 1529 ntBASIC17.56■□□□□ 0.4
DUX1O43812 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DUX1O43812 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.56■□□□□ 0.4
DUX1O43812 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DUX1O43812 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
DUX1O43812 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DUX1O43812 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
DUX1O43812 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DUX1O43812 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DUX1O43812 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
DUX1O43812 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DUX1O43812 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DUX1O43812 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
DUX1O43812 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DUX1O43812 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DUX1O43812 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DUX1O43812 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DUX1O43812 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DUX1O43812 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DUX1O43812 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.55■□□□□ 0.4
DUX1O43812 TSPY12P-201ENST00000421279 868 ntBASIC17.55■□□□□ 0.4
DUX1O43812 FDX1P1-201ENST00000449115 551 ntBASIC17.55■□□□□ 0.4
DUX1O43812 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.55■□□□□ 0.4
DUX1O43812 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.55■□□□□ 0.4
DUX1O43812 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
DUX1O43812 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.55■□□□□ 0.4
DUX1O43812 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DUX1O43812 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
DUX1O43812 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DUX1O43812 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
DUX1O43812 AC099343.3-201ENST00000605834 2503 ntBASIC17.55■□□□□ 0.4
DUX1O43812 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DUX1O43812 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DUX1O43812 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
DUX1O43812 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DUX1O43812 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DUX1O43812 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DUX1O43812 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.55■□□□□ 0.4
DUX1O43812 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
DUX1O43812 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.54■□□□□ 0.4
DUX1O43812 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DUX1O43812 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DUX1O43812 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DUX1O43812 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DUX1O43812 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.54■□□□□ 0.4
DUX1O43812 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DUX1O43812 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
DUX1O43812 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DUX1O43812 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.54■□□□□ 0.4
DUX1O43812 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
DUX1O43812 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DUX1O43812 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DUX1O43812 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DUX1O43812 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DUX1O43812 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.54■□□□□ 0.4
DUX1O43812 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.54■□□□□ 0.4
DUX1O43812 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DUX1O43812 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
DUX1O43812 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.54■□□□□ 0.4
DUX1O43812 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DUX1O43812 AL024508.2-201ENST00000607749 1894 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms