Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MSI1O43347 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MSI1O43347 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.03■□□□□ 0.64
MSI1O43347 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MSI1O43347 AC104581.1-202ENST00000635932 2618 ntBASIC19.03■□□□□ 0.64
MSI1O43347 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSI1O43347 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.02■□□□□ 0.64
MSI1O43347 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSI1O43347 AL138781.2-201ENST00000617896 1843 ntBASIC19.02■□□□□ 0.64
MSI1O43347 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSI1O43347 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
MSI1O43347 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSI1O43347 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSI1O43347 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.02■□□□□ 0.64
MSI1O43347 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
MSI1O43347 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSI1O43347 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.02■□□□□ 0.64
MSI1O43347 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MSI1O43347 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MSI1O43347 KRT18P48-201ENST00000434763 852 ntBASIC19.02■□□□□ 0.64
MSI1O43347 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MSI1O43347 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSI1O43347 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.02■□□□□ 0.64
MSI1O43347 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
MSI1O43347 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSI1O43347 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
MSI1O43347 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.02■□□□□ 0.64
MSI1O43347 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MSI1O43347 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
MSI1O43347 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
MSI1O43347 LINC01126-201ENST00000623515 1646 ntBASIC19.02■□□□□ 0.64
MSI1O43347 Z83836.1-201ENST00000624605 1642 ntBASIC19.02■□□□□ 0.64
MSI1O43347 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.02■□□□□ 0.63
MSI1O43347 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.02■□□□□ 0.63
MSI1O43347 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.02■□□□□ 0.63
MSI1O43347 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.02■□□□□ 0.63
MSI1O43347 AC073592.3-201ENST00000625118 1834 ntBASIC19.02■□□□□ 0.63
MSI1O43347 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSI1O43347 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.01■□□□□ 0.63
MSI1O43347 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.01■□□□□ 0.63
MSI1O43347 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSI1O43347 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSI1O43347 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSI1O43347 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.01■□□□□ 0.63
MSI1O43347 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSI1O43347 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSI1O43347 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.01■□□□□ 0.63
MSI1O43347 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.01■□□□□ 0.63
MSI1O43347 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MSI1O43347 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.01■□□□□ 0.63
MSI1O43347 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.01■□□□□ 0.63
MSI1O43347 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSI1O43347 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
MSI1O43347 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSI1O43347 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.01■□□□□ 0.63
MSI1O43347 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.01■□□□□ 0.63
MSI1O43347 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSI1O43347 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MSI1O43347 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
MSI1O43347 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MSI1O43347 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSI1O43347 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MSI1O43347 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSI1O43347 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.01■□□□□ 0.63
MSI1O43347 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MSI1O43347 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19■□□□□ 0.63
MSI1O43347 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MSI1O43347 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
MSI1O43347 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19■□□□□ 0.63
MSI1O43347 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19■□□□□ 0.63
MSI1O43347 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MSI1O43347 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19■□□□□ 0.63
MSI1O43347 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19■□□□□ 0.63
MSI1O43347 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19■□□□□ 0.63
MSI1O43347 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19■□□□□ 0.63
MSI1O43347 AC020763.4-201ENST00000623414 4170 ntBASIC19■□□□□ 0.63
MSI1O43347 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
MSI1O43347 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MSI1O43347 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MSI1O43347 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MSI1O43347 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MSI1O43347 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
MSI1O43347 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MSI1O43347 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19■□□□□ 0.63
MSI1O43347 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19■□□□□ 0.63
MSI1O43347 AC005332.3-201ENST00000589904 676 ntBASIC19■□□□□ 0.63
MSI1O43347 AC069148.1-201ENST00000608741 768 ntBASIC19■□□□□ 0.63
MSI1O43347 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MSI1O43347 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
MSI1O43347 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19■□□□□ 0.63
MSI1O43347 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MSI1O43347 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MSI1O43347 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MSI1O43347 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19■□□□□ 0.63
MSI1O43347 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MSI1O43347 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19■□□□□ 0.63
MSI1O43347 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MSI1O43347 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.99■□□□□ 0.63
MSI1O43347 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MSI1O43347 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms