Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF9O43307 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF9O43307 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF9O43307 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF9O43307 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
ARHGEF9O43307 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.03■□□□□ 0.32
ARHGEF9O43307 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF9O43307 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF9O43307 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF9O43307 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF9O43307 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF9O43307 FAM197Y1-201ENST00000421178 764 ntBASIC17.03■□□□□ 0.32
ARHGEF9O43307 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.03■□□□□ 0.32
ARHGEF9O43307 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF9O43307 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.03■□□□□ 0.32
ARHGEF9O43307 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF9O43307 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.03■□□□□ 0.32
ARHGEF9O43307 MIR6786-201ENST00000616843 113 ntBASIC17.03■□□□□ 0.32
ARHGEF9O43307 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ARHGEF9O43307 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.03■□□□□ 0.32
ARHGEF9O43307 NOC2LP2-201ENST00000407594 1944 ntBASIC17.03■□□□□ 0.32
ARHGEF9O43307 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.03■□□□□ 0.32
ARHGEF9O43307 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
ARHGEF9O43307 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ARHGEF9O43307 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ARHGEF9O43307 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF9O43307 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF9O43307 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.02■□□□□ 0.32
ARHGEF9O43307 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ARHGEF9O43307 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF9O43307 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.02■□□□□ 0.32
ARHGEF9O43307 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF9O43307 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
ARHGEF9O43307 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF9O43307 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF9O43307 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
ARHGEF9O43307 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF9O43307 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.02■□□□□ 0.32
ARHGEF9O43307 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.02■□□□□ 0.32
ARHGEF9O43307 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.02■□□□□ 0.32
ARHGEF9O43307 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.02■□□□□ 0.32
ARHGEF9O43307 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.02■□□□□ 0.32
ARHGEF9O43307 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.02■□□□□ 0.32
ARHGEF9O43307 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
ARHGEF9O43307 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF9O43307 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF9O43307 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.02■□□□□ 0.31
ARHGEF9O43307 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ARHGEF9O43307 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ARHGEF9O43307 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.02■□□□□ 0.31
ARHGEF9O43307 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
ARHGEF9O43307 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.31
ARHGEF9O43307 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
ARHGEF9O43307 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ARHGEF9O43307 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
ARHGEF9O43307 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.02■□□□□ 0.31
ARHGEF9O43307 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
ARHGEF9O43307 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ARHGEF9O43307 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ARHGEF9O43307 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.02■□□□□ 0.31
ARHGEF9O43307 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF9O43307 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF9O43307 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.01■□□□□ 0.31
ARHGEF9O43307 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF9O43307 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
ARHGEF9O43307 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF9O43307 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
ARHGEF9O43307 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF9O43307 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
ARHGEF9O43307 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF9O43307 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF9O43307 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
ARHGEF9O43307 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.01■□□□□ 0.31
ARHGEF9O43307 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF9O43307 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF9O43307 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF9O43307 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF9O43307 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.01■□□□□ 0.31
ARHGEF9O43307 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ARHGEF9O43307 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ARHGEF9O43307 AP002982.1-201ENST00000492365 877 ntBASIC17.01■□□□□ 0.31
ARHGEF9O43307 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF9O43307 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF9O43307 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ARHGEF9O43307 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF9O43307 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF9O43307 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
ARHGEF9O43307 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF9O43307 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ARHGEF9O43307 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF9O43307 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
ARHGEF9O43307 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF9O43307 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.01■□□□□ 0.31
ARHGEF9O43307 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF9O43307 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17■□□□□ 0.31
ARHGEF9O43307 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF9O43307 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF9O43307 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ARHGEF9O43307 GAS2L1P1-201ENST00000420145 1480 ntBASIC17■□□□□ 0.31
ARHGEF9O43307 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms