Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MID1O15344 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.35■□□□□ 0.53
MID1O15344 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
MID1O15344 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.35■□□□□ 0.53
MID1O15344 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.35■□□□□ 0.53
MID1O15344 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.35■□□□□ 0.53
MID1O15344 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MID1O15344 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MID1O15344 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MID1O15344 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MID1O15344 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MID1O15344 AC246785.2-201ENST00000432512 513 ntBASIC18.35■□□□□ 0.53
MID1O15344 AC091607.1-201ENST00000490318 1060 ntBASIC18.35■□□□□ 0.53
MID1O15344 KRT18P31-201ENST00000506277 1292 ntBASIC18.35■□□□□ 0.53
MID1O15344 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MID1O15344 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MID1O15344 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.35■□□□□ 0.53
MID1O15344 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.35■□□□□ 0.53
MID1O15344 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MID1O15344 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.35■□□□□ 0.53
MID1O15344 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
MID1O15344 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.35■□□□□ 0.53
MID1O15344 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.35■□□□□ 0.53
MID1O15344 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MID1O15344 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.34■□□□□ 0.53
MID1O15344 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.34■□□□□ 0.53
MID1O15344 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MID1O15344 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MID1O15344 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MID1O15344 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.34■□□□□ 0.53
MID1O15344 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MID1O15344 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MID1O15344 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.34■□□□□ 0.53
MID1O15344 IGHV3-47-201ENST00000425060 335 ntBASIC18.34■□□□□ 0.53
MID1O15344 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MID1O15344 VENTXP7-201ENST00000475503 772 ntBASIC18.34■□□□□ 0.53
MID1O15344 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
MID1O15344 AP005901.3-202ENST00000581653 237 ntBASIC18.34■□□□□ 0.53
MID1O15344 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MID1O15344 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MID1O15344 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MID1O15344 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MID1O15344 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.34■□□□□ 0.53
MID1O15344 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
MID1O15344 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
MID1O15344 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
MID1O15344 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MID1O15344 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.33■□□□□ 0.53
MID1O15344 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
MID1O15344 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
MID1O15344 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MID1O15344 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MID1O15344 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
MID1O15344 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MID1O15344 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.33■□□□□ 0.52
MID1O15344 EMBP1-201ENST00000458200 901 ntBASIC18.33■□□□□ 0.52
MID1O15344 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.33■□□□□ 0.52
MID1O15344 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.33■□□□□ 0.52
MID1O15344 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MID1O15344 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.33■□□□□ 0.52
MID1O15344 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MID1O15344 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MID1O15344 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MID1O15344 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
MID1O15344 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MID1O15344 AL024508.2-201ENST00000607749 1894 ntBASIC18.33■□□□□ 0.52
MID1O15344 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.33■□□□□ 0.52
MID1O15344 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MID1O15344 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MID1O15344 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MID1O15344 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
MID1O15344 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.32■□□□□ 0.52
MID1O15344 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.32■□□□□ 0.52
MID1O15344 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.32■□□□□ 0.52
MID1O15344 AC011840.4-201ENST00000578471 627 ntBASIC18.32■□□□□ 0.52
MID1O15344 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.32■□□□□ 0.52
MID1O15344 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.32■□□□□ 0.52
MID1O15344 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MID1O15344 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MID1O15344 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.32■□□□□ 0.52
MID1O15344 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MID1O15344 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.32■□□□□ 0.52
MID1O15344 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MID1O15344 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MID1O15344 NSUN5P1-202ENST00000421140 1535 ntBASIC18.32■□□□□ 0.52
MID1O15344 NSUN5P2-203ENST00000457352 1529 ntBASIC18.32■□□□□ 0.52
MID1O15344 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.32■□□□□ 0.52
MID1O15344 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MID1O15344 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MID1O15344 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
MID1O15344 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MID1O15344 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MID1O15344 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MID1O15344 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MID1O15344 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.31■□□□□ 0.52
MID1O15344 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.31■□□□□ 0.52
MID1O15344 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MID1O15344 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MID1O15344 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.31■□□□□ 0.52
MID1O15344 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms