Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CASQ2O14958 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CASQ2O14958 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CASQ2O14958 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CASQ2O14958 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CASQ2O14958 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CASQ2O14958 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CASQ2O14958 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CASQ2O14958 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.44■□□□□ 0.38
CASQ2O14958 KRT19P1-201ENST00000405746 1186 ntBASIC17.44■□□□□ 0.38
CASQ2O14958 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.44■□□□□ 0.38
CASQ2O14958 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.44■□□□□ 0.38
CASQ2O14958 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CASQ2O14958 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CASQ2O14958 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.44■□□□□ 0.38
CASQ2O14958 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.44■□□□□ 0.38
CASQ2O14958 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.44■□□□□ 0.38
CASQ2O14958 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.44■□□□□ 0.38
CASQ2O14958 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CASQ2O14958 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASQ2O14958 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.43■□□□□ 0.38
CASQ2O14958 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASQ2O14958 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CASQ2O14958 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASQ2O14958 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CASQ2O14958 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASQ2O14958 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.43■□□□□ 0.38
CASQ2O14958 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CASQ2O14958 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CASQ2O14958 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASQ2O14958 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.43■□□□□ 0.38
CASQ2O14958 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.43■□□□□ 0.38
CASQ2O14958 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASQ2O14958 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.43■□□□□ 0.38
CASQ2O14958 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.43■□□□□ 0.38
CASQ2O14958 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASQ2O14958 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.43■□□□□ 0.38
CASQ2O14958 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.43■□□□□ 0.38
CASQ2O14958 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.43■□□□□ 0.38
CASQ2O14958 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CASQ2O14958 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.43■□□□□ 0.38
CASQ2O14958 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASQ2O14958 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASQ2O14958 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASQ2O14958 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASQ2O14958 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CASQ2O14958 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ2O14958 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ2O14958 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.42■□□□□ 0.38
CASQ2O14958 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
CASQ2O14958 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ2O14958 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ2O14958 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CASQ2O14958 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.42■□□□□ 0.38
CASQ2O14958 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ2O14958 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ2O14958 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ2O14958 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ2O14958 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ2O14958 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ2O14958 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ2O14958 AC096631.2-201ENST00000436136 790 ntBASIC17.42■□□□□ 0.38
CASQ2O14958 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.42■□□□□ 0.38
CASQ2O14958 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.42■□□□□ 0.38
CASQ2O14958 AL589743.5-201ENST00000616611 1050 ntBASIC17.42■□□□□ 0.38
CASQ2O14958 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ2O14958 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ2O14958 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CASQ2O14958 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.42■□□□□ 0.38
CASQ2O14958 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
CASQ2O14958 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.42■□□□□ 0.38
CASQ2O14958 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CASQ2O14958 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.42■□□□□ 0.38
CASQ2O14958 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms