Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDH17O14917 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH17O14917 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCDH17O14917 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDH17O14917 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH17O14917 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH17O14917 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PCDH17O14917 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDH17O14917 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 AL031133.1-201ENST00000406807 723 ntBASIC17.53■□□□□ 0.4
PCDH17O14917 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDH17O14917 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDH17O14917 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDH17O14917 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDH17O14917 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
PCDH17O14917 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDH17O14917 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PCDH17O14917 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PCDH17O14917 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDH17O14917 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDH17O14917 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDH17O14917 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
PCDH17O14917 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDH17O14917 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDH17O14917 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDH17O14917 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH17O14917 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDH17O14917 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH17O14917 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH17O14917 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH17O14917 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH17O14917 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PCDH17O14917 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH17O14917 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDH17O14917 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PCDH17O14917 KRT8P32-201ENST00000512863 1461 ntBASIC17.52■□□□□ 0.4
PCDH17O14917 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDH17O14917 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH17O14917 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH17O14917 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDH17O14917 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH17O14917 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH17O14917 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH17O14917 AL671277.2-201ENST00000458060 996 ntBASIC17.52■□□□□ 0.4
PCDH17O14917 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDH17O14917 GCSHP2-201ENST00000560971 527 ntBASIC17.52■□□□□ 0.4
PCDH17O14917 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH17O14917 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDH17O14917 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PCDH17O14917 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
PCDH17O14917 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDH17O14917 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PCDH17O14917 HOXB1-202ENST00000577092 1414 ntBASIC17.52■□□□□ 0.4
PCDH17O14917 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDH17O14917 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
PCDH17O14917 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH17O14917 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH17O14917 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDH17O14917 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDH17O14917 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH17O14917 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PCDH17O14917 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
PCDH17O14917 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH17O14917 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH17O14917 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDH17O14917 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH17O14917 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH17O14917 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCDH17O14917 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH17O14917 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH17O14917 NOC2LP1-202ENST00000452600 2235 ntBASIC17.51■□□□□ 0.39
PCDH17O14917 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH17O14917 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH17O14917 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH17O14917 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH17O14917 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH17O14917 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH17O14917 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDH17O14917 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDH17O14917 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDH17O14917 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms