Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LINC01548A6NM66 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LINC01548A6NM66 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC01548A6NM66 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LINC01548A6NM66 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC01548A6NM66 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LINC01548A6NM66 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.47□□□□□ -0.09
LINC01548A6NM66 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.47□□□□□ -0.09
LINC01548A6NM66 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC01548A6NM66 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC01548A6NM66 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC01548A6NM66 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.47□□□□□ -0.09
LINC01548A6NM66 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.47□□□□□ -0.09
LINC01548A6NM66 AL136038.3-201ENST00000561909 1096 ntBASIC14.47□□□□□ -0.09
LINC01548A6NM66 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
LINC01548A6NM66 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.47□□□□□ -0.09
LINC01548A6NM66 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LINC01548A6NM66 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LINC01548A6NM66 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01548A6NM66 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LINC01548A6NM66 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01548A6NM66 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01548A6NM66 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01548A6NM66 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01548A6NM66 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01548A6NM66 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01548A6NM66 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
LINC01548A6NM66 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01548A6NM66 AC073592.3-201ENST00000625118 1834 ntBASIC14.46□□□□□ -0.09
LINC01548A6NM66 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01548A6NM66 LINC01126-201ENST00000623515 1646 ntBASIC14.46□□□□□ -0.09
LINC01548A6NM66 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01548A6NM66 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01548A6NM66 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.46□□□□□ -0.09
LINC01548A6NM66 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01548A6NM66 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.46□□□□□ -0.09
LINC01548A6NM66 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.46□□□□□ -0.09
LINC01548A6NM66 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LINC01548A6NM66 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.46□□□□□ -0.09
LINC01548A6NM66 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01548A6NM66 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
LINC01548A6NM66 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LINC01548A6NM66 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LINC01548A6NM66 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC01548A6NM66 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.46□□□□□ -0.1
LINC01548A6NM66 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LINC01548A6NM66 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.46□□□□□ -0.1
LINC01548A6NM66 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.46□□□□□ -0.1
LINC01548A6NM66 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC01548A6NM66 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LINC01548A6NM66 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LINC01548A6NM66 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01548A6NM66 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01548A6NM66 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01548A6NM66 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01548A6NM66 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.45□□□□□ -0.1
LINC01548A6NM66 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LINC01548A6NM66 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01548A6NM66 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01548A6NM66 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01548A6NM66 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01548A6NM66 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01548A6NM66 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01548A6NM66 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LINC01548A6NM66 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01548A6NM66 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01548A6NM66 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01548A6NM66 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01548A6NM66 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LINC01548A6NM66 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01548A6NM66 ESPNP-201ENST00000270691 2015 ntBASIC14.45□□□□□ -0.1
LINC01548A6NM66 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01548A6NM66 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.45□□□□□ -0.1
LINC01548A6NM66 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LINC01548A6NM66 MIR662-201ENST00000384847 95 ntBASIC14.45□□□□□ -0.1
LINC01548A6NM66 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms