Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
SPDYE4A6NLX3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.7■□□□□ 0.91
SPDYE4A6NLX3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SPDYE4A6NLX3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
SPDYE4A6NLX3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 TSPY14P-201ENST00000303979 915 ntBASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 MESTP1-201ENST00000404287 994 ntBASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 AC004980.1-204ENST00000429707 299 ntBASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 EIF2S2P5-201ENST00000457635 968 ntBASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 TFP1-202ENST00000475455 1573 ntBASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPDYE4A6NLX3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 KRT18P16-201ENST00000510337 1294 ntBASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 AC011298.2-201ENST00000617989 482 ntBASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.69■□□□□ 0.9
SPDYE4A6NLX3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 AC006333.2-201ENST00000607957 2099 ntBASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 AC006011.2-201ENST00000621313 1158 ntBASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SPDYE4A6NLX3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPDYE4A6NLX3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms