Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D3BA6NDS4 AC112777.1-201ENST00000540175 1423 ntBASIC18.62■□□□□ 0.57
TBC1D3BA6NDS4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TBC1D3BA6NDS4 MYLKP1-201ENST00000509077 1580 ntBASIC18.62■□□□□ 0.57
TBC1D3BA6NDS4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.62■□□□□ 0.57
TBC1D3BA6NDS4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D3BA6NDS4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D3BA6NDS4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TBC1D3BA6NDS4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.62■□□□□ 0.57
TBC1D3BA6NDS4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D3BA6NDS4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TBC1D3BA6NDS4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 AC116562.4-201ENST00000641316 2276 ntBASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 NUS1P2-201ENST00000417358 873 ntBASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 AC104692.2-201ENST00000603054 253 ntBASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TBC1D3BA6NDS4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.6■□□□□ 0.57
TBC1D3BA6NDS4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.59■□□□□ 0.57
TBC1D3BA6NDS4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms