Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.32■■□□□ 1
SSC5DA1L4H1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.32■■□□□ 1
SSC5DA1L4H1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21.32■■□□□ 1
SSC5DA1L4H1 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.32■■□□□ 1
SSC5DA1L4H1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC21.32■■□□□ 1
SSC5DA1L4H1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.32■■□□□ 1
SSC5DA1L4H1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC21.32■■□□□ 1
SSC5DA1L4H1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SSC5DA1L4H1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.32■■□□□ 1
SSC5DA1L4H1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.32■■□□□ 1
SSC5DA1L4H1 AC107918.4-202ENST00000641623 219 ntBASIC21.32■■□□□ 1
SSC5DA1L4H1 LINC01126-201ENST00000623515 1646 ntBASIC21.32■■□□□ 1
SSC5DA1L4H1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SSC5DA1L4H1 AL161938.1-201ENST00000569833 2180 ntBASIC21.32■■□□□ 1
SSC5DA1L4H1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.32■■□□□ 1
SSC5DA1L4H1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.32■■□□□ 1
SSC5DA1L4H1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SSC5DA1L4H1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SSC5DA1L4H1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SSC5DA1L4H1 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SSC5DA1L4H1 AC007967.2-201ENST00000432613 625 ntBASIC21.31■■□□□ 1
SSC5DA1L4H1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC21.31■■□□□ 1
SSC5DA1L4H1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.31■■□□□ 1
SSC5DA1L4H1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.31■■□□□ 1
SSC5DA1L4H1 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.31■■□□□ 1
SSC5DA1L4H1 UNC93B6-202ENST00000528242 690 ntBASIC21.31■■□□□ 1
SSC5DA1L4H1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.31■■□□□ 1
SSC5DA1L4H1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SSC5DA1L4H1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.31■■□□□ 1
SSC5DA1L4H1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SSC5DA1L4H1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SSC5DA1L4H1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SSC5DA1L4H1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
SSC5DA1L4H1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
SSC5DA1L4H1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.31■■□□□ 1
SSC5DA1L4H1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SSC5DA1L4H1 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.31■■□□□ 1
SSC5DA1L4H1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.31■■□□□ 1
SSC5DA1L4H1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SSC5DA1L4H1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.31■■□□□ 1
SSC5DA1L4H1 AC004967.1-201ENST00000453589 447 ntBASIC21.31■■□□□ 1
SSC5DA1L4H1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC21.31■■□□□ 1
SSC5DA1L4H1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.31■■□□□ 1
SSC5DA1L4H1 MTDHP4-201ENST00000600287 670 ntBASIC21.31■■□□□ 1
SSC5DA1L4H1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SSC5DA1L4H1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SSC5DA1L4H1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SSC5DA1L4H1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SSC5DA1L4H1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.3■■□□□ 1
SSC5DA1L4H1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SSC5DA1L4H1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
SSC5DA1L4H1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SSC5DA1L4H1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SSC5DA1L4H1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.3■■□□□ 1
SSC5DA1L4H1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SSC5DA1L4H1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SSC5DA1L4H1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
SSC5DA1L4H1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC21.3■■□□□ 1
SSC5DA1L4H1 AC040169.1-201ENST00000565382 521 ntBASIC21.3■■□□□ 1
SSC5DA1L4H1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.3■■□□□ 1
SSC5DA1L4H1 NKAPP1-205ENST00000585790 367 ntBASIC21.3■■□□□ 1
SSC5DA1L4H1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SSC5DA1L4H1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SSC5DA1L4H1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SSC5DA1L4H1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SSC5DA1L4H1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.3■■□□□ 1
SSC5DA1L4H1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SSC5DA1L4H1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SSC5DA1L4H1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SSC5DA1L4H1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
SSC5DA1L4H1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SSC5DA1L4H1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SSC5DA1L4H1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SSC5DA1L4H1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SSC5DA1L4H1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SSC5DA1L4H1 MYLKP1-201ENST00000509077 1580 ntBASIC21.29■■□□□ 1
SSC5DA1L4H1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SSC5DA1L4H1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SSC5DA1L4H1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.29■■□□□ 1
SSC5DA1L4H1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SSC5DA1L4H1 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC21.29■■□□□ 1
SSC5DA1L4H1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC21.29■■□□□ 1
SSC5DA1L4H1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.29■■□□□ 1
SSC5DA1L4H1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.29■■□□□ 1
SSC5DA1L4H1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.29■■□□□ 1
SSC5DA1L4H1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
SSC5DA1L4H1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SSC5DA1L4H1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SSC5DA1L4H1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SSC5DA1L4H1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
SSC5DA1L4H1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SSC5DA1L4H1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SSC5DA1L4H1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SSC5DA1L4H1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SSC5DA1L4H1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.28■■□□□ 1
SSC5DA1L4H1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.28■■□□□ 1
SSC5DA1L4H1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SSC5DA1L4H1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.28■■□□□ 1
SSC5DA1L4H1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.28■■□□□ 1
SSC5DA1L4H1 AC027796.2-201ENST00000575326 344 ntBASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms